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Journal Articles

Status of J-PARC E07: Systematic study of double strangeness nuclei with hybrid emulsion method

Junya Yoshida, Keizo Agari, Jung Keun Ahn, Takaya Akaishi, Yuya Akazawa, Sakiko Ashikaga, Bernd Bassalleck, Sebastian Bleser, Wonji Choi, Woo Seung Chung, Hiroyuki Ekawa, Yoko Endo, Yuki Fujikawa, Norina Fujioka, Manami Fujita, Ryosuke Goto, Yuncheng Han, Shoichi Hasegawa, Tadashi Hashimoto, Shuhei Hayakawa, Tomonari Hayakawa, Emi Hayata, Kenneth Hicks, Erina Hirose, Masanori Hirose, Ryotaro Honda, Kaoru Hoshino, Suharu Hoshino, Kenji Hosomi, Sang Hoon Hwang, Yudai Ichikawa, Masaya Ichikawa, Masaharu Ieiri, Kenichi Imai, Kento Inaba, Yuji Ishikawa, Abzal Iskendir, Hiroki Ito, Kazuyua Ito, Shunsuke Kanatsuki, Honoka Kanauchi, Ayumi Kasagi, Toshihide Kawai, Min Ho Kim, Shin Hyung Kim, Sung Hyun Kim, Young Jun Kim, Shinji Kinbara, Ryuta Kiuchi, Hidetaka Kobayashi, Kazuya Kobayashi, Takeshi Koike, Ami Koshikawa, Jae Yong Lee, Jong Won Lee, Myeong Jae Lee, Tianli Ma, Shota Matsumoto, Michifumi Minakawa, Koji Miwa, Aung Thu Moe, Tae Jin Moon, Manabu Moritsu, Yuichi Nagase, Yoshiyuki Nakada, Manami Nakagawa, Daisuke Nakashima, Kazuma Nakazawa, Takuya Nanamura, Megumi Naruki, Aung Nay Lin Nyaw, Yu Ogura, Masaki Ohashi, KenIchiro Oue, Shotaro Ozawa, Josef Pochodzalla, Sun Young Ryu, Hiroyuki Sako, Yuki Sasaki, Susumu Sato, Yoshinori Sato, Falk Schupp, Michiko Sekimoto, Koutarou Shiratori, Min Min Soe, Myint Kyaw Soe, Jong Yoon Sohn, Hitoshi Sugimura, Kazuki Suzuki, May Sweet, Hitoshi Takahashi, Toshiyuki Takahashi, Yu Takahashi, Tomoya Takeda, Hirokazu Tamura, Kiyoshi Tanida, Aye Moh Moh Theint, Khin Than Tint, Yuichi Toyama, Mifuyu Ukai, Eiichi Umezaki, Toyoki Watabe, Ken Watanabe, Takeshi Yamamoto, Seong Bae Yang, Chun Sil Yoon, Masahiro Yoshimoto, Donhai Zhang, Zhi Zhang
Journal: AIP Conference Proceedings
AIP Conf. Proc. 2130, 020016 (2019)
https://doi.org/10.1063/1.5118384
Published: July 2019
View article titled, Status of J-PARC E07: Systematic study of double strangeness nuclei with hybrid emulsion method
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Journal Articles

Conceptual designs for variably polarizing leaf undulator

Takeshi Yamamoto, Shigemi Sasaki, Mao Ye, Shan Qiao
Journal: AIP Conference Proceedings
AIP Conf. Proc. 2054, 030026 (2019)
https://doi.org/10.1063/1.5084589
Published: January 2019
View article titled, Conceptual designs for variably polarizing leaf undulator
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Journal Articles

Communication: Self-assembly of a model supramolecular polymer studied by replica exchange with solute tempering

Hadi H. Arefi, Takeshi Yamamoto
Journal: The Journal of Chemical Physics
J. Chem. Phys. 147, 211102 (2017)
https://doi.org/10.1063/1.5008275
Published: December 2017
View article titled, Communication: Self-assembly of a model supramolecular polymer studied by replica exchange with solute tempering
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Includes: Supplementary data
Journal Articles

Assessing the accuracy of integral equation theories for nano-sized hydrophobic solutes in water

Takatoshi Fujita, Takeshi Yamamoto
Journal: The Journal of Chemical Physics
J. Chem. Phys. 147, 014110 (2017)
https://doi.org/10.1063/1.4990502
Published: July 2017
View article titled, Assessing the accuracy of integral equation theories for nano-sized hydrophobic solutes in water
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Includes: Supplementary data
Journal Articles

Origin of lattice bowing of freestanding GaN substrates grown by hydride vapor phase epitaxy

Keisuke Yamane, Tohoru Matsubara, Takeshi Yamamoto, Narihito Okada, Akihiro Wakahara, Kazuyuki Tadatomo
Journal: Journal of Applied Physics
J. Appl. Phys. 119, 045707 (2016)
https://doi.org/10.1063/1.4940914
Published: January 2016
View article titled, Origin of lattice bowing of freestanding GaN substrates grown by hydride vapor phase epitaxy
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Journal Articles

Variational calculation of quantum mechanical/molecular mechanical free energy with electronic polarization of solvent

Hiroshi Nakano, Takeshi Yamamoto
Journal: The Journal of Chemical Physics
J. Chem. Phys. 136, 134107 (2012)
https://doi.org/10.1063/1.3699234
Published: April 2012
View article titled, Variational calculation of quantum mechanical/molecular mechanical free energy with electronic polarization of solvent
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Includes: Supplementary data
Journal Articles

Solution reaction space Hamiltonian based on an electrostatic potential representation of solvent dynamics

Shinji Aono, Takeshi Yamamoto, Shigeki Kato
Journal: The Journal of Chemical Physics
J. Chem. Phys. 134, 144108 (2011)
https://doi.org/10.1063/1.3572057
Published: April 2011
View article titled, Solution reaction space Hamiltonian based on an electrostatic potential representation of solvent dynamics
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Includes: Supplementary data
Journal Articles

A wave-function based approach for polarizable charge model: Systematic comparison of polarization effects on protic, aprotic, and ionic liquids

Hiroshi Nakano, Takeshi Yamamoto, Shigeki Kato
Journal: The Journal of Chemical Physics
J. Chem. Phys. 132, 044106 (2010)
https://doi.org/10.1063/1.3298873
Published: January 2010
View article titled, A wave-function based approach for polarizable charge model: Systematic comparison of polarization effects on protic, aprotic, and ionic liquids
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Includes: Supplementary data
Journal Articles

Variational and perturbative formulations of quantum mechanical/molecular mechanical free energy with mean-field embedding and its analytical gradients

Takeshi Yamamoto
Journal: The Journal of Chemical Physics
J. Chem. Phys. 129, 244104 (2008)
https://doi.org/10.1063/1.3041381
Published: December 2008
View article titled, Variational and perturbative formulations of quantum mechanical/molecular mechanical free energy with mean-field embedding and its analytical gradients
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Journal Articles

Ab initio calculation of proton-coupled electron transfer rates using the external-potential representation: A ubiquinol complex in solution

Takeshi Yamamoto, Shigeki Kato
Journal: The Journal of Chemical Physics
J. Chem. Phys. 126, 224514 (2007)
https://doi.org/10.1063/1.2737048
Published: June 2007
View article titled, <em>Ab initio</em> calculation of proton-coupled electron transfer rates using the external-potential representation: A ubiquinol complex in solution
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Journal Articles

Comment on “Comment on ‘Simple reversible molecular dynamics algorithms for Nosé-Hoover chain dynamics’ ” [J. Chem. Phys. 110, 3623 (1999)]

Takeshi Yamamoto
Journal: The Journal of Chemical Physics
J. Chem. Phys. 124, 217101 (2006)
https://doi.org/10.1063/1.2202355
Published: June 2006
View article titled, Comment on “Comment on ‘Simple reversible molecular dynamics algorithms for Nosé-Hoover chain dynamics’ ” [J. Chem. Phys. 110, 3623 (1999)]
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Journal Articles

Connection between the direct and mapping forms of a factorized classical propagator

Takeshi Yamamoto
Journal: The Journal of Chemical Physics
J. Chem. Phys. 124, 146103 (2006)
https://doi.org/10.1063/1.2193152
Published: April 2006
View article titled, Connection between the direct and mapping forms of a factorized classical propagator
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Journal Articles

Path-integral virial estimator for reaction-rate calculation based on the quantum instanton approximation

Sandy Yang, Takeshi Yamamoto, William H. Miller
Journal: The Journal of Chemical Physics
J. Chem. Phys. 124, 084102 (2006)
https://doi.org/10.1063/1.2171693
Published: February 2006
View article titled, Path-integral virial estimator for reaction-rate calculation based on the quantum instanton approximation
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Journal Articles

Path integral evaluation of the quantum instanton rate constant for proton transfer in a polar solvent

Takeshi Yamamoto, William H. Miller
Journal: The Journal of Chemical Physics
J. Chem. Phys. 122, 044106 (2005)
https://doi.org/10.1063/1.1832598
Published: January 2005
View article titled, Path integral evaluation of the quantum instanton rate constant for proton transfer in a polar solvent
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Journal Articles

Path integral calculation of thermal rate constants within the quantum instanton approximation: Application to the H + CH 4 → H 2 + CH 3 hydrogen abstraction reaction in full Cartesian space

Yi Zhao, Takeshi Yamamoto, William H. Miller
Journal: The Journal of Chemical Physics
J. Chem. Phys. 120, 3100–3107 (2004)
https://doi.org/10.1063/1.1641006
Published: February 2004
View article titled, Path integral calculation of thermal rate constants within the quantum instanton approximation: Application to the H + CH 4 → H 2 + CH 3 hydrogen abstraction reaction in full Cartesian space
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Journal Articles

On the efficient path integral evaluation of thermal rate constants within the quantum instanton approximation

Takeshi Yamamoto, William H. Miller
Journal: The Journal of Chemical Physics
J. Chem. Phys. 120, 3086–3099 (2004)
https://doi.org/10.1063/1.1641005
Published: February 2004
View article titled, On the efficient path integral evaluation of thermal rate constants within the quantum instanton approximation
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Journal Articles

Semiclassical calculation of thermal rate constants in full Cartesian space: The benchmark reaction D + H 2 → DH + H

Takeshi Yamamoto, William H. Miller
Journal: The Journal of Chemical Physics
J. Chem. Phys. 118, 2135–2152 (2003)
https://doi.org/10.1063/1.1533081
Published: February 2003
View article titled, Semiclassical calculation of thermal rate constants in full Cartesian space: The benchmark reaction D + H 2 → DH + H
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Journal Articles

Combining semiclassical time evolution and quantum Boltzmann operator to evaluate reactive flux correlation function for thermal rate constants of complex systems

Takeshi Yamamoto, Haobin Wang, William H. Miller
Journal: The Journal of Chemical Physics
J. Chem. Phys. 116, 7335–7349 (2002)
https://doi.org/10.1063/1.1464539
Published: May 2002
View article titled, Combining semiclassical time evolution and quantum Boltzmann operator to evaluate reactive flux correlation function for thermal rate constants of complex systems
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Journal Articles

Full-dimensional quantum dynamics study on the mode-specific unimolecular dissociation reaction of HFCO

Takeshi Yamamoto, Shigeki Kato
Journal: The Journal of Chemical Physics
J. Chem. Phys. 112, 8006–8016 (2000)
https://doi.org/10.1063/1.481400
Published: May 2000
View article titled, Full-dimensional quantum dynamics study on the mode-specific unimolecular dissociation reaction of HFCO
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Journal Articles

Evaluation of exposure dose repeatability in synchrotron radiation lithography

Kenji Itoga, Hiroaki Sumitani, Hiroshi Watanabe, Teruhiko Kumada, Itsuo Kodera, Shinichi Satoh, Nobuaki Ogushi, Satoshi Oishi, Ryou Edo, Takeshi Yamamoto, Yutaka Watanabe
Journal: Journal of Vacuum Science & Technology B
J. Vac. Sci. Technol. B 18, 774–779 (2000)
https://doi.org/10.1116/1.591275
Published: March 2000
View article titled, Evaluation of exposure dose repeatability in synchrotron radiation lithography
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