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Sergey M. Bezrukov
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Journal Articles

Permeability and diffusion resistance of porous membranes: Analytical theory and its numerical test

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Alexei T. Skvortsov, Leonardo Dagdug, Emily F. Hilder, Alexander M. Berezhkovskii, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 158, 054114 (2023)
https://doi.org/10.1063/5.0138036
Published: February 2023
View articletitled, Permeability and diffusion resistance of porous membranes: Analytical theory and its numerical test
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Journal Articles

Intrinsic diffusion resistance of a membrane channel, mean first-passage times between its ends, and equilibrium unidirectional fluxes

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Alexander M. Berezhkovskii, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 156, 071103 (2022)
https://doi.org/10.1063/5.0082482
Published: February 2022
View articletitled, Intrinsic diffusion resistance of a membrane channel, mean first-passage times between its ends, and equilibrium unidirectional fluxes
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Journal Articles

Surface-facilitated trapping by active sites: From catalysts to viruses

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Mikita M. Misiura, Alexander M. Berezhkovskii, Sergey M. Bezrukov, Anatoly B. Kolomeisky
Journal: The Journal of Chemical Physics
J. Chem. Phys. 155, 184106 (2021)
https://doi.org/10.1063/5.0069917
Published: November 2021
View articletitled, Surface-facilitated trapping by active sites: From catalysts to viruses
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Journal Articles

Localized potential well vs binding site: Mapping solute dynamics in a membrane channel onto one-dimensional description

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Alexander M. Berezhkovskii, Sergey M. Bezrukov, Dmitrii E. Makarov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 154, 111101 (2021)
https://doi.org/10.1063/5.0044044
Published: March 2021
View articletitled, Localized potential well vs binding site: Mapping solute dynamics in a membrane channel onto one-dimensional description
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Journal Articles

Two-site versus continuum diffusion model of blocker dynamics in a membrane channel: Comparative analysis of escape kinetics

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Alexander M. Berezhkovskii, Leonardo Dagdug, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 151, 054113 (2019)
https://doi.org/10.1063/1.5110489
Published: August 2019
View articletitled, Two-site versus continuum diffusion model of blocker dynamics in a membrane channel: Comparative analysis of escape kinetics
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Journal Articles

Blocker escape kinetics from a membrane channel analyzed by mapping blocker diffusive dynamics onto a two-site model

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Alexander M. Berezhkovskii, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 150, 194103 (2019)
https://doi.org/10.1063/1.5095594
Published: May 2019
View articletitled, Blocker escape kinetics from a membrane channel analyzed by mapping blocker diffusive dynamics onto a two-site model
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Journal Articles

Trapping of diffusing particles by small absorbers localized in a spherical region

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Alexander M. Berezhkovskii, Leonardo Dagdug, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 150, 064107 (2019)
https://doi.org/10.1063/1.5083808
Published: February 2019
View articletitled, Trapping of diffusing particles by small absorbers localized in a spherical region
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Journal Articles

First passage, looping, and direct transition in expanding and narrowing tubes: Effects of the entropy potential

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Alexander M. Berezhkovskii, Leonardo Dagdug, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 147, 134104 (2017)
https://doi.org/10.1063/1.4993129
Published: October 2017
View articletitled, First passage, looping, and direct transition in expanding and narrowing tubes: Effects of the entropy potential
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Journal Articles

A new insight into diffusional escape from a biased cylindrical trap

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Alexander M. Berezhkovskii, Leonardo Dagdug, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 147, 104103 (2017)
https://doi.org/10.1063/1.5002127
Published: September 2017
View articletitled, A new insight into diffusional escape from a biased cylindrical trap
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Journal Articles

Effect of stochastic gating on channel-facilitated transport of non-interacting and strongly repelling solutes

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Alexander M. Berezhkovskii, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 147, 084109 (2017)
https://doi.org/10.1063/1.4986902
Published: August 2017
View articletitled, Effect of stochastic gating on channel-facilitated transport of non-interacting and strongly repelling solutes
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Journal Articles

Bulk-mediated surface transport in the presence of bias

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Alexander M. Berezhkovskii, Leonardo Dagdug, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 147, 014103 (2017)
https://doi.org/10.1063/1.4991730
Published: July 2017
View articletitled, Bulk-mediated surface transport in the presence of bias
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Journal Articles

Unbiased diffusion in two-dimensional channels with corrugated walls

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Roberto Verdel, Leonardo Dagdug, Alexander M. Berezhkovskii, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 144, 084106 (2016)
https://doi.org/10.1063/1.4942470
Published: February 2016
View articletitled, Unbiased diffusion in two-dimensional channels with corrugated walls
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Journal Articles

Range of applicability of modified Fick-Jacobs equation in two dimensions

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Alexander M. Berezhkovskii, Leonardo Dagdug, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 143, 164102 (2015)
https://doi.org/10.1063/1.4934223
Published: October 2015
View articletitled, Range of applicability of modified Fick-Jacobs equation in two dimensions
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Journal Articles

A new approach to the problem of bulk-mediated surface diffusion

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Alexander M. Berezhkovskii, Leonardo Dagdug, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 143, 084103 (2015)
https://doi.org/10.1063/1.4928741
Published: August 2015
View articletitled, A new approach to the problem of bulk-mediated surface diffusion
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Journal Articles

Biased diffusion in three-dimensional comb-like structures

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Alexander M. Berezhkovskii, Leonardo Dagdug, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 142, 134101 (2015)
https://doi.org/10.1063/1.4916310
Published: April 2015
View articletitled, Biased diffusion in three-dimensional comb-like structures
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Journal Articles

From normal to anomalous diffusion in comb-like structures in three dimensions

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Alexander M. Berezhkovskii, Leonardo Dagdug, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 141, 054907 (2014)
https://doi.org/10.1063/1.4891566
Published: August 2014
View articletitled, From normal to anomalous diffusion in comb-like structures in three dimensions
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Journal Articles

Trapping of diffusing particles by clusters of absorbing disks on a reflecting wall with disk centers on sites of a square lattice

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Alexander M. Berezhkovskii, Leonardo Dagdug, Marco-Vinicio Vazquez, Vladimir A. Lizunov, Joshua Zimmerberg, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 138, 064105 (2013)
https://doi.org/10.1063/1.4790370
Published: February 2013
View articletitled, Trapping of diffusing particles by clusters of absorbing disks on a reflecting wall with disk centers on sites of a square lattice
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Journal Articles

Particle lifetime in cylindrical cavity with absorbing spot on the wall: Going beyond the narrow escape problem

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Leonardo Dagdug, Alexander M. Berezhkovskii, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 137, 234108 (2012)
https://doi.org/10.1063/1.4772183
Published: December 2012
View articletitled, Particle lifetime in cylindrical cavity with absorbing spot on the wall: Going beyond the narrow escape problem
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Journal Articles

Force-dependent mobility and entropic rectification in tubes of periodically varying geometry

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Leonardo Dagdug, Alexander M. Berezhkovskii, Yurii A. Makhnovskii, Vladimir Yu. Zitserman, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 136, 214110 (2012)
https://doi.org/10.1063/1.4726193
Published: June 2012
View articletitled, Force-dependent mobility and entropic rectification in tubes of periodically varying geometry
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Journal Articles

Communication: Clusters of absorbing disks on a reflecting wall: Competition for diffusing particles

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Alexander M. Berezhkovskii, Leonardo Dagdug, Vladimir A. Lizunov, Joshua Zimmerberg, Sergey M. Bezrukov
Journal: The Journal of Chemical Physics
J. Chem. Phys. 136, 211102 (2012)
https://doi.org/10.1063/1.4726015
Published: June 2012
View articletitled, Communication: Clusters of absorbing disks on a reflecting wall: Competition for diffusing particles
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