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Journal Articles

Domain tethering impacts dimerization and DNA-mediated allostery in the human transcription factor FoxP1

Perla Cruz, Nicolás Paredes, Isabel Asela, Narendar Kolimi, José Alejandro Molina, César A. Ramírez-Sarmiento, Rajen Goutam, Gangton Huang, Exequiel Medina, Hugo Sanabria
Journal: The Journal of Chemical Physics
J. Chem. Phys. 158, 195101 (2023)
https://doi.org/10.1063/5.0138782
Published: May 2023
View article titled, Domain tethering impacts dimerization and DNA-mediated allostery in the human transcription factor FoxP1
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Includes: Supplementary data
Journal Articles

Assessing rotation and solvation dynamics in ethaline deep eutectic solvent and its solutions with methanol

Mary M. LaRocca, Gary A. Baker, Mark P. Heitz
Journal: The Journal of Chemical Physics
J. Chem. Phys. 155, 034505 (2021)
https://doi.org/10.1063/5.0056653
Published: July 2021
View article titled, Assessing rotation and solvation dynamics in ethaline deep eutectic solvent and its solutions with methanol
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Includes: Supplementary data
Journal Articles

Dynamic elements and kinetics: Most favorable conformations of peptides in solution with measurements and simulations

Gouri S. Jas, Ricardo Vallejo-Calzada, Carey K. Johnson, Krzysztof Kuczera
Journal: The Journal of Chemical Physics
J. Chem. Phys. 151, 225102 (2019)
https://doi.org/10.1063/1.5131782
Published: December 2019
View article titled, Dynamic elements and kinetics: Most favorable conformations of peptides in solution with measurements and simulations
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Includes: Supplementary data
Journal Articles

Dielectric relaxation in acetamide + urea deep eutectics and neat molten urea: Origin of time scales via temperature dependent measurements and computer simulations

Kallol Mukherjee, Suman Das, Ejaj Tarif, Anjan Barman, Ranjit Biswas
Journal: The Journal of Chemical Physics
J. Chem. Phys. 149, 124501 (2018)
https://doi.org/10.1063/1.5040071
Published: September 2018
View article titled, Dielectric relaxation in acetamide + urea deep eutectics and neat molten urea: Origin of time scales via temperature dependent measurements and computer simulations
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Includes: Supplementary data
Journal Articles

Polarized two-photon photoselection in EGFP: Theory and experiment

T. A. Masters, R. J. Marsh, T. S. Blacker, D. A. Armoogum, B. Larijani, A. J. Bain
Journal: The Journal of Chemical Physics
J. Chem. Phys. 148, 134311 (2018)
https://doi.org/10.1063/1.5011642
Published: April 2018
View article titled, Polarized two-photon photoselection in EGFP: Theory and experiment
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Journal Articles

Time-resolved stimulated emission depletion and energy transfer dynamics in two-photon excited EGFP

T. A. Masters, N. A. Robinson, R. J. Marsh, T. S. Blacker, D. A. Armoogum, B. Larijani, A. J. Bain
Journal: The Journal of Chemical Physics
J. Chem. Phys. 148, 134312 (2018)
https://doi.org/10.1063/1.5011643
Published: April 2018
View article titled, Time-resolved stimulated emission depletion and energy transfer dynamics in two-photon excited EGFP
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Journal Articles

Precision and accuracy in smFRET based structural studies—A benchmark study of the Fast-Nano-Positioning System

Julia Nagy, Tobias Eilert, Jens Michaelis
Journal: The Journal of Chemical Physics
J. Chem. Phys. 148, 123308 (2018)
https://doi.org/10.1063/1.5006477
Published: December 2017
View article titled, Precision and accuracy in smFRET based structural studies—A benchmark study of the Fast-Nano-Positioning System
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Includes: Supplementary data
Journal Articles

Non-equilibrium phase transitions in a liquid crystal

K. Dan, M. Roy, A. Datta
Journal: The Journal of Chemical Physics
J. Chem. Phys. 143, 094501 (2015)
https://doi.org/10.1063/1.4929607
Published: September 2015
View article titled, Non-equilibrium phase transitions in a liquid crystal
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Journal Articles

Two-color two-photon excited fluorescence of indole: Determination of wavelength-dependent molecular parameters

Sebastian Herbrich, Tawfik Al-Hadhuri, Karl-Heinz Gericke, Peter S. Shternin, Andrey G. Smolin, Oleg S. Vasyutinskii
Journal: The Journal of Chemical Physics
J. Chem. Phys. 142, 024310 (2015)
https://doi.org/10.1063/1.4905140
Published: January 2015
View article titled, Two-color two-photon excited fluorescence of indole: Determination of wavelength-dependent molecular parameters
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Journal Articles

Identifiability analysis of rotational diffusion tensor and electronic transition moments measured in time-resolved fluorescence depolarization experiment

Jacek P. Szubiakowski
Journal: The Journal of Chemical Physics
J. Chem. Phys. 140, 224106 (2014)
https://doi.org/10.1063/1.4881257
Published: June 2014
View article titled, Identifiability analysis of rotational diffusion tensor and electronic transition moments measured in time-resolved fluorescence depolarization experiment
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Journal Articles

Alternative selection rules for one- and two-photon transitions in tribenzotetraazachlorin: Quasi-centrosymmetrical π-conjugation pathway of formally non-centrosymmetrical molecule

Nikolay S. Makarov, Mikhail Drobizhev, Geoffrey Wicks, Elena A. Makarova, Evgeny A. Lukyanets, Aleksander Rebane
Journal: The Journal of Chemical Physics
J. Chem. Phys. 138, 214314 (2013)
https://doi.org/10.1063/1.4807594
Published: June 2013
View article titled, Alternative selection rules for one- and two-photon transitions in tribenzotetraazachlorin: Quasi-centrosymmetrical π-conjugation pathway of formally non-centrosymmetrical molecule
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Includes: Supplementary data
Journal Articles

Are rare, long waiting times between rearrangement events responsible for the slowdown of the dynamics at the glass transition?

Ji Won Ahn, Bryn Falahee, Chiara Del Piccolo, Michael Vogel, Dieter Bingemann
Journal: The Journal of Chemical Physics
J. Chem. Phys. 138, 12A527 (2013)
https://doi.org/10.1063/1.4775740
Published: January 2013
View article titled, Are rare, long waiting times between rearrangement events responsible for the slowdown of the dynamics at the glass transition?
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Journal Articles

Medium decoupling of dynamics at temperatures ∼100 K above glass-transition temperature: A case study with (acetamide + lithium bromide/nitrate) melts

Biswajit Guchhait, Snehasis Daschakraborty, Ranjit Biswas
Journal: The Journal of Chemical Physics
J. Chem. Phys. 136, 174503 (2012)
https://doi.org/10.1063/1.4705315
Published: May 2012
View article titled, Medium decoupling of dynamics at temperatures ∼100 K above glass-transition temperature: A case study with (acetamide + lithium bromide/nitrate) melts
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Includes: Supplementary data
Journal Articles

Deoxycholate induced tetramer of αA-crystallin and sites of phosphorylation: Fluorescence correlation spectroscopy and femtosecond solvation dynamics

Aritra Chowdhury, Supratik Sen Mojumdar, Aparajita Choudhury, Rajat Banerjee, Kali Pada Das, Dibyendu Kumar Sasmal, Kankan Bhattacharyya
Journal: The Journal of Chemical Physics
J. Chem. Phys. 136, 155101 (2012)
https://doi.org/10.1063/1.3702810
Published: April 2012
View article titled, Deoxycholate induced tetramer of <em>α</em>A-crystallin and sites of phosphorylation: Fluorescence correlation spectroscopy and femtosecond solvation dynamics
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Journal Articles

Exciton coherence lifetimes from electronic structure

John A. Parkhill, David G. Tempel, Alan Aspuru-Guzik
Journal: The Journal of Chemical Physics
J. Chem. Phys. 136, 104510 (2012)
https://doi.org/10.1063/1.3689858
Published: March 2012
View article titled, Exciton coherence lifetimes from electronic structure
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Journal Articles

Time scale separation leads to position-dependent diffusion along a slow coordinate

Alexander Berezhkovskii, Attila Szabo
Journal: The Journal of Chemical Physics
J. Chem. Phys. 135, 074108 (2011)
https://doi.org/10.1063/1.3626215
Published: August 2011
View article titled, Time scale separation leads to position-dependent diffusion along a slow coordinate
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Journal Articles

Do the interfacial fluidities of cationic reverse micelles enhance with an increase in the water content?

K. S. Mali, G. B. Dutt
Journal: The Journal of Chemical Physics
J. Chem. Phys. 131, 174708 (2009)
https://doi.org/10.1063/1.3257964
Published: November 2009
View article titled, Do the interfacial fluidities of cationic reverse micelles enhance with an increase in the water content?
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Journal Articles

Photophysics and rotational relaxation dynamics of cationic phenazinium dyes in anionic reverse micelles: Effect of methyl substitution

Debosreeta Bose, Deboleena Sarkar, Agnishwar Girigoswami, Atanu Mahata, Debanjana Ghosh, Nitin Chattopadhyay
Journal: The Journal of Chemical Physics
J. Chem. Phys. 131, 114707 (2009)
https://doi.org/10.1063/1.3225476
Published: September 2009
View article titled, Photophysics and rotational relaxation dynamics of cationic phenazinium dyes in anionic reverse micelles: Effect of methyl substitution
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Journal Articles

Deuterium isotope effect on femtosecond solvation dynamics in methyl β -cyclodextrins

Dibyendu Kumar Sasmal, Shantanu Dey, Dibyendu Kumar Das, Kankan Bhattacharyya
Journal: The Journal of Chemical Physics
J. Chem. Phys. 131, 044509 (2009)
https://doi.org/10.1063/1.3176020
Published: July 2009
View article titled, Deuterium isotope effect on femtosecond solvation dynamics in methyl β -cyclodextrins
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Journal Articles

Photoselection in uniaxial liquid crystals: The effect of rotational Brownian motion on measurements of orientational distribution function

K. Razi Naqvi
Journal: The Journal of Chemical Physics
J. Chem. Phys. 73, 3019–3020 (1980)
https://doi.org/10.1063/1.440439
Published: July 2008
View article titled, Photoselection in uniaxial liquid crystals: The effect of rotational Brownian motion on measurements of orientational distribution function
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