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Journal Articles

Micrometer-sized integrated plasmonic–electroacoustic hybrid transducer for biosensing applications

Open Access
Miguel Huerga Represa, Antonio Rodríguez Alhambra, Melisa del Barrio, Elena Benito-Peña, Teona Mirea, Carlos Angulo Barrios
Journal: Journal of Applied Physics
J. Appl. Phys. 137, 214505 (2025)
https://doi.org/10.1063/5.0268859
Published: June 2025
View articletitled, Micrometer-sized integrated plasmonic–electroacoustic hybrid transducer for biosensing applications
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Journal Articles

Estimating transparency and penetration depth enhancement induced by clearing tissue using optical coherence tomography

Open Access
Zilai Wang, Wenhui Fang, Xin Wang, Zhiwei Men
Journal: Journal of Applied Physics
J. Appl. Phys. 137, 084901 (2025)
https://doi.org/10.1063/5.0245613
Published: February 2025
View articletitled, Estimating transparency and penetration depth enhancement induced by clearing tissue using optical coherence tomography
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Journal Articles

A practical guide to light-sheet microscopy for nanoscale imaging: Looking beyond the cell

FeaturedOpen Access
Stephanie N. Kramer, Jeanpun Antarasen, Cole R. Reinholt, Lydia Kisley
Journal: Journal of Applied Physics
J. Appl. Phys. 136, 091101 (2024)
https://doi.org/10.1063/5.0218262
Published: September 2024
View articletitled, A practical guide to light-sheet microscopy for nanoscale imaging: Looking beyond the cell
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Journal Articles

Multiscale modeling and analysis in biophysics

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Alessio Gizzi, Andrew D. McCulloch, Corina S. Drapaca
Journal: Journal of Applied Physics
J. Appl. Phys. 135, 210401 (2024)
https://doi.org/10.1063/5.0219187
Published: June 2024
View articletitled, Multiscale modeling and analysis in biophysics
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Journal Articles

Plasma–liquid interactions in the presence of organic matter—A perspective

Open Access
Katharina Stapelmann, Sophia Gershman, Vandana Miller
Journal: Journal of Applied Physics
J. Appl. Phys. 135, 160901 (2024)
https://doi.org/10.1063/5.0203125
Published: April 2024
View articletitled, Plasma–liquid interactions in the presence of organic matter—A perspective
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Journal Articles

Two-step nucleation and crystal growth in a metastable solution

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Dmitri V. Alexandrov, Eugenya V. Makoveeva
Journal: Journal of Applied Physics
J. Appl. Phys. 134, 234701 (2023)
https://doi.org/10.1063/5.0173801
Published: December 2023
View articletitled, Two-step nucleation and crystal growth in a metastable solution
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Journal Articles

The relationship between pH sensitivity and biosensitivity in graphene field effect transistor biosensors

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Decarle S. Jin, Moses O. Nnaji, Hilena F. Gezahagne, Katherine T. Young, Eleanor L. Brightbill, Eric M. Vogel
Journal: Journal of Applied Physics
J. Appl. Phys. 134, 174502 (2023)
https://doi.org/10.1063/5.0168956
Published: November 2023
View articletitled, The relationship between pH sensitivity and biosensitivity in graphene field effect transistor biosensors
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Journal Articles

Multiscale computational framework to investigate integrin mechanosensing and cell adhesion

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Andre R. Montes, Gabriela Gutierrez, Adrian Buganza Tepole, Mohammad R. K. Mofrad
Journal: Journal of Applied Physics
J. Appl. Phys. 134, 114702 (2023)
https://doi.org/10.1063/5.0164826
Published: September 2023
View articletitled, Multiscale computational framework to investigate integrin mechanosensing and cell adhesion
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Includes: Supplementary data
Journal Articles

Generative pretrained autoregressive transformer graph neural network applied to the analysis and discovery of novel proteins

Open Access
Markus J. Buehler
Journal: Journal of Applied Physics
J. Appl. Phys. 134, 084902 (2023)
https://doi.org/10.1063/5.0157367
Published: August 2023
View articletitled, Generative pretrained autoregressive transformer graph neural network applied to the analysis and discovery of novel proteins
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Journal Articles

Electroporation from mitochondria to cell clusters: Model development toward analyzing electrically driven bioeffects over a large spatial range

Free
W. Milestone, C. Baker, A. L. Garner, R. P. Joshi
Journal: Journal of Applied Physics
J. Appl. Phys. 133, 244701 (2023)
https://doi.org/10.1063/5.0154789
Published: June 2023
View articletitled, Electroporation from mitochondria to cell clusters: Model development toward analyzing electrically driven bioeffects over a large spatial range
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Journal Articles

Trapping proteins on nanopores by dielectrophoresis

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Taylor Colburn, Dmitry V. Matyushov
Journal: Journal of Applied Physics
J. Appl. Phys. 133, 164701 (2023)
https://doi.org/10.1063/5.0144564
Published: April 2023
View articletitled, Trapping proteins on nanopores by dielectrophoresis
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Includes: Supplementary data
Journal Articles

Multiphysics of microfluidics and nanofluidics

Free
Shaurya Prakash, Gungun Lin
Journal: Journal of Applied Physics
J. Appl. Phys. 133, 120401 (2023)
https://doi.org/10.1063/5.0149799
Published: March 2023
View articletitled, Multiphysics of microfluidics and nanofluidics
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Journal Articles

A review of electrochemical glucose sensing based on transition metal phosphides

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Seetha Lakshmy, Shilpa Santhosh, Nandakumar Kalarikkal, Chandra Sekhar Rout, Brahmananda Chakraborthy
Journal: Journal of Applied Physics
J. Appl. Phys. 133, 070702 (2023)
https://doi.org/10.1063/5.0111591
Published: February 2023
View articletitled, A review of electrochemical glucose sensing based on transition metal phosphides
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Journal Articles

Polyatomic time crystals of the brain neuron extracted microtubule are projected like a hologram meters away

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Komal Saxena, Pushpendra Singh, Jhimli Sarkar, Pathik Sahoo, Subrata Ghosh, Soami Daya Krishnananda, Anirban Bandyopadhyay
Journal: Journal of Applied Physics
J. Appl. Phys. 132, 194401 (2022)
https://doi.org/10.1063/5.0130618
Published: November 2022
View articletitled, Polyatomic time crystals of the brain neuron extracted microtubule are projected like a hologram meters away
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Includes: Supplementary data
Journal Articles

A theoretical examination of localized nanoscale induction by single domain magnetic particles

Open Access
Michael G. Christiansen, Nima Mirkhani, William Hornslien, Simone Schuerle
Journal: Journal of Applied Physics
J. Appl. Phys. 132, 174304 (2022)
https://doi.org/10.1063/5.0102153
Published: November 2022
View articletitled, A theoretical examination of localized nanoscale induction by single domain magnetic particles
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Includes: Supplementary data
Journal Articles

Multifunctional nanopore electrode array method for characterizing and manipulating single entities in attoliter-volume enclosures

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Seol Baek, Allison R. Cutri, Donghoon Han, Seung-Ryong Kwon, Julius Reitemeier, Vignesh Sundaresan, Paul W. Bohn
Journal: Journal of Applied Physics
J. Appl. Phys. 132, 174501 (2022)
https://doi.org/10.1063/5.0101693
Published: November 2022
View articletitled, Multifunctional nanopore electrode array method for characterizing and manipulating single entities in attoliter-volume enclosures
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Includes: Supplementary data
Journal Articles

Pore formation in MoS2 monolayer under irradiation by swift heavy ions: A molecular dynamics study

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A. Kolesnikova, V. Osipov
Journal: Journal of Applied Physics
J. Appl. Phys. 132, 124301 (2022)
https://doi.org/10.1063/5.0108339
Published: September 2022
View articletitled, Pore formation in MoS2 monolayer under irradiation by swift heavy ions: A molecular dynamics study
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Journal Articles

Study of pulsed laser-induced heating in bio-plasmonic solution using combined photoacoustic and probe beam deflection technique: Thermoacoustic effects

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Mohammad E. Khosroshahi, Yesha Patel, Vaughan Woll-Morison, Roxana Chabok
Journal: Journal of Applied Physics
J. Appl. Phys. 131, 094701 (2022)
https://doi.org/10.1063/5.0082611
Published: March 2022
View articletitled, Study of pulsed laser-induced heating in bio-plasmonic solution using combined photoacoustic and probe beam deflection technique: Thermoacoustic effects
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Journal Articles

Experimental measurement of kinetic parameters using quantum plasmonic sensing

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K. T. Mpofu, C. Lee, G. E. M. Maguire, H. G. Kruger, M. S. Tame
Journal: Journal of Applied Physics
J. Appl. Phys. 131, 084402 (2022)
https://doi.org/10.1063/5.0079896
Published: February 2022
View articletitled, Experimental measurement of kinetic parameters using quantum plasmonic sensing
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Journal Articles

Next generation of nanozymes: A perspective of the challenges to match biological performance

Open Access
G. F. Goya, A. Mayoral, E. Winkler, R. D. Zysler, C. Bagnato, M. Raineri, J. A. Fuentes-García, E. Lima, Jr.
Journal: Journal of Applied Physics
J. Appl. Phys. 130, 190903 (2021)
https://doi.org/10.1063/5.0061499
Published: November 2021
View articletitled, Next generation of nanozymes: A perspective of the challenges to match biological performance
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