The effects of several patterning process steps on the critical current density Jc and microwave surface resistance Rs of a‐axis oriented films of YBa2Cu3O7 on LaAlO3 are described. The films were prepared by cosputtering from Y, BaF2, and Cu targets, followed by annealing in water‐saturated O2. Jc and Rs parameters were measured by mutual inductance and parallel plate resonator techniques, respectively, so that the films did not require patterning for the measurement. Application of a polymer film followed by stripping in acetone caused modest degradation, while stripping with an O2 plasma resulted in no change in the parameters. Brief ion milling, as well as baking at 185 °C with polymer film present, caused severe degradation; other treatments had intermediate effects. The degree of degradation suggests that the surface damage results in secondary effects that penetrate well into the film. A formula is derived for the change in Rs due to a surface layer, providing a quantitative comparison to experiment.

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