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Journal Articles

Immunogenic cell death-related cancer-associated fibroblast clusters and prognostic risk model in cervical cancer

Fei Wu, Yue Xu
Journal: APL Bioengineering
APL Bioeng. 8, 046114 (2024)
https://doi.org/10.1063/5.0240772
Published: December 2024
View article titled, Immunogenic cell death-related cancer-associated fibroblast clusters and prognostic risk model in cervical cancer
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Journal Articles

High cell throughput, programmable fixation reveals the RNA and protein co-regulation with spatially resolved NFκB pseudo-signaling

Editor’s Pick
Nicholas Zhang, Mingshuang Wang, Dhruv Nambiar, Samyukta Iyer, Priyam Kadakia, Qianqi Luo, Sicheng Pang, Aaron Qu, Nivik Sanjay Bharadwaj, Peng Qiu, Ahmet F. Coskun
Journal: APL Bioengineering
APL Bioeng. 8, 046108 (2024)
https://doi.org/10.1063/5.0227054
Published: November 2024
View article titled, High cell throughput, programmable fixation reveals the RNA and protein co-regulation with spatially resolved NFκB pseudo-signaling
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Journal Articles

Apoptosis-associated genetic mechanisms in the transition from rheumatoid arthritis to osteoporosis: A bioinformatics and functional analysis approach

Featured
Hao-Ju Lo, Chun-Hao Tsai, Tsan-Wen Huang
Journal: APL Bioengineering
APL Bioeng. 8, 046107 (2024)
https://doi.org/10.1063/5.0233961
Published: November 2024
View article titled, Apoptosis-associated genetic mechanisms in the transition from rheumatoid arthritis to osteoporosis: A bioinformatics and functional analysis approach
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Journal Articles

Three-dimensional matrix stiffness modulates mechanosensitive and phenotypic alterations in oral squamous cell carcinoma spheroids

Maulee Sheth, Manju Sharma, Maria Lehn, HasanAl Reza, Takanori Takebe, Vinita Takiar, Trisha Wise-Draper, Leyla Esfandiari
Journal: APL Bioengineering
APL Bioeng. 8, 036106 (2024)
https://doi.org/10.1063/5.0210134
Published: July 2024
View article titled, Three-dimensional matrix stiffness modulates mechanosensitive and phenotypic alterations in oral squamous cell carcinoma spheroids
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Journal Articles

Study liquid–liquid phase separation with optical microscopy: A methodology review

Xiufeng Zhang, Haoyang Li, Yue Ma, Dongping Zhong, Shangguo Hou
Journal: APL Bioengineering
APL Bioeng. 7, 021502 (2023)
https://doi.org/10.1063/5.0137008
Published: May 2023
View article titled, Study liquid–liquid phase separation with optical microscopy: A methodology review
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Journal Articles

Nuclear mechanoprotection: From tissue atlases as blueprints to distinctive regulation of nuclear lamins

FeaturedScilight
Mai Wang, Irena Ivanovska, Manasvita Vashisth, Dennis E. Discher
Journal: APL Bioengineering
APL Bioeng. 6, 021504 (2022)
https://doi.org/10.1063/5.0080392
Published: June 2022
View article titled, Nuclear mechanoprotection: From tissue atlases as blueprints to distinctive regulation of nuclear lamins
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Journal Articles

GSVD- and tensor GSVD-uncovered patterns of DNA copy-number alterations predict adenocarcinomas survival in general and in response to platinum

Matthew W. Bradley, Katherine A. Aiello, Sri Priya Ponnapalli, Heidi A. Hanson, Orly Alter
Journal: APL Bioengineering
APL Bioeng. 3, 036104 (2019)
https://doi.org/10.1063/1.5099268
Published: August 2019
View article titled, GSVD- and tensor GSVD-uncovered patterns of DNA copy-number alterations predict adenocarcinomas survival in general and in response to platinum
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Includes: Supplementary data
Journal Articles

Interconnected feedback loops among ESRP1, HAS2, and CD44 regulate epithelial-mesenchymal plasticity in cancer

Mohit Kumar Jolly, Bogdan-Tiberius Preca, Satyendra C. Tripathi, Dongya Jia, Jason T. George, Samir M. Hanash, Thomas Brabletz, Marc P. Stemmler, Jochen Maurer, Herbert Levine
Journal: APL Bioengineering
APL Bioeng. 2, 031908 (2018)
https://doi.org/10.1063/1.5024874
Published: August 2018
View article titled, Interconnected feedback loops among ESRP1, HAS2, and CD44 regulate epithelial-mesenchymal plasticity in cancer
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Includes: Supplementary data