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Journal Articles

Nuclear mechanoprotection: From tissue atlases as blueprints to distinctive regulation of nuclear lamins

Mai Wang, Irena Ivanovska, Manasvita Vashisth, Dennis E. Discher
Journal: APL Bioengineering
APL Bioeng. 6, 021504 (2022)
https://doi.org/10.1063/5.0080392
Published: June 2022
View article titled, Nuclear mechanoprotection: From tissue atlases as blueprints to distinctive regulation of nuclear lamins
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Journal Articles

The mechanobiology of nuclear phase separation

Daniel S. W. Lee, Amy R. Strom, Clifford P. Brangwynne
Journal: APL Bioengineering
APL Bioeng. 6, 021503 (2022)
https://doi.org/10.1063/5.0083286
Published: April 2022
View article titled, The mechanobiology of nuclear phase separation
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Journal Articles

Evaluation of chromatin mesoscale organization

Dana Lorber, Talila Volk
Journal: APL Bioengineering
APL Bioeng. 6, 010902 (2022)
https://doi.org/10.1063/5.0069286
Published: January 2022
View article titled, Evaluation of chromatin mesoscale organization
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Includes: Supplementary data
Journal Articles

High shear stress enhances endothelial permeability in the presence of the risk haplotype at 9p21.3

Evan L. Teng, Evan M. Masutani, Benjamin Yeoman, Jessica Fung, Rachel Lian, Brenda Ngo, Aditya Kumar, Jesse K. Placone, Valentina Lo Sardo, Adam J. Engler
Journal: APL Bioengineering
APL Bioeng. 5, 036102 (2021)
https://doi.org/10.1063/5.0054639
Published: July 2021
View article titled, High shear stress enhances endothelial permeability in the presence of the risk haplotype at 9p21.3
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Includes: Supplementary data
Journal Articles

Toward improved models of human cancer: Two perspectives

Roger D. Kamm
Journal: APL Bioengineering
APL Bioeng. 5, 010402 (2021)
https://doi.org/10.1063/5.0042324
Published: February 2021
View article titled, Toward improved models of human cancer: Two perspectives
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Journal Articles

Mapping regulators of cell fate determination: Approaches and challenges

Aditya Kumar, Prashant Mali
Journal: APL Bioengineering
APL Bioeng. 4, 031501 (2020)
https://doi.org/10.1063/5.0004611
Published: July 2020
View article titled, Mapping regulators of cell fate determination: Approaches and challenges
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Journal Articles

Retrospective clinical trial experimentally validates glioblastoma genome-wide pattern of DNA copy-number alterations predictor of survival

Sri Priya Ponnapalli, Matthew W. Bradley, Karen Devine, Jay Bowen, Sara E. Coppens, Kristen M. Leraas, Brett A. Milash, Fuqiang Li, Huijuan Luo, Shi Qiu, Kui Wu, Huanming Yang, Carl T. Wittwer, Cheryl A. Palmer, Randy L. Jensen, Julie M. Gastier-Foster, Heidi A. Hanson, Jill S. Barnholtz-Sloan, Orly Alter
Journal: APL Bioengineering
APL Bioeng. 4, 026106 (2020)
https://doi.org/10.1063/1.5142559
Published: May 2020
View article titled, Retrospective clinical trial experimentally validates glioblastoma genome-wide pattern of DNA copy-number alterations predictor of survival
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Includes: Supplementary data
Journal Articles

Divide and conquer: A perspective on biochips for single-cell and rare-molecule analysis by next-generation sequencing

A. C. Lee, Y. Lee, D. Lee, S. Kwon
Journal: APL Bioengineering
APL Bioeng. 3, 020901 (2019)
https://doi.org/10.1063/1.5095962
Published: June 2019
View article titled, Divide and conquer: A perspective on biochips for single-cell and rare-molecule analysis by next-generation sequencing
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Journal Articles

Identification of on-target mutagenesis during correction of a beta-thalassemia splice mutation in iPS cells with optimised CRISPR/Cas9-double nickase reveals potential safety concerns

Suad Alateeq, Dmitry Ovchinnikov, Timothy Tracey, Deanne Whitworth, Abdullah Al-Rubaish, Amein Al-Ali, Ernst Wolvetang
Journal: APL Bioengineering
APL Bioeng. 2, 046103 (2018)
https://doi.org/10.1063/1.5048625
Published: December 2018
View article titled, Identification of on-target mutagenesis during correction of a beta-thalassemia splice mutation in iPS cells with optimised CRISPR/Cas9-double nickase reveals potential safety concerns
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Includes: Supplementary data
Journal Articles

Mathematically universal and biologically consistent astrocytoma genotype encodes for transformation and predicts survival phenotype

Katherine A. Aiello, Sri Priya Ponnapalli, Orly Alter
Journal: APL Bioengineering
APL Bioeng. 2, 031909 (2018)
https://doi.org/10.1063/1.5037882
Published: September 2018
View article titled, Mathematically universal and biologically consistent astrocytoma genotype encodes for transformation and predicts survival phenotype
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Includes: Supplementary data
Journal Articles

Perspective: Engineering noise in biological systems towards predictive stochastic design

Roy D. Dar, Ron Weiss
Journal: APL Bioengineering
APL Bioeng. 2, 020901 (2018)
https://doi.org/10.1063/1.5025033
Published: May 2018
View article titled, Perspective: Engineering noise in biological systems towards predictive stochastic design
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