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Interactive molecular dynamics in virtual reality from quantum chemistry to drug binding: An open-source multi-person framework
Michael B. O’Connor; Simon J. Bennie; Helen M. Deeks; Alexander Jamieson-Binnie; Alex J. Jones; Robin J. Shannon; Rebecca Walters; Thomas J. Mitchell; Adrian J. Mulholland; David R. Glowacki
J. Chem. Phys. 150, 220901 (2019)
https://doi.org/10.1063/1.5092590
COMMUNICATIONS
ARTICLES
Theoretical Methods and Algorithms
Molecular inner-shell photoabsorption/photoionization cross sections at core-valence-separated coupled cluster level: Theory and examples
In Special Collection:
Ultrafast Spectroscopy and Diffraction from XUV to X-ray
Bruno Nunes Cabral Tenorio; Torsha Moitra; Marco Antonio Chaer Nascimento; Alexandre Braga Rocha; Sonia Coriani
J. Chem. Phys. 150, 224104 (2019)
https://doi.org/10.1063/1.5096777
Quantum size effect affecting environment assisted electron capture in quantum confinements
In Special Collection:
Dynamics of Open Quantum Systems
J. Chem. Phys. 150, 224105 (2019)
https://doi.org/10.1063/1.5095999
Open system dynamics using Gaussian-based multiconfigurational time-dependent Hartree wavefunctions: Application to environment-modulated tunneling
In Special Collection:
Dynamics of Open Quantum Systems
J. Chem. Phys. 150, 224106 (2019)
https://doi.org/10.1063/1.5099983
Vibrational investigation of nucleobases by means of divide and conquer semiclassical dynamics
J. Chem. Phys. 150, 224107 (2019)
https://doi.org/10.1063/1.5100503
A scalable algorithm of numerical real-time path integral for quantum dissipative systems
J. Chem. Phys. 150, 224108 (2019)
https://doi.org/10.1063/1.5100881
Frozen-mode small polaron quantum master equation with variational bound for excitation energy transfer in molecular aggregates
In Special Collection:
Dynamics of Open Quantum Systems
J. Chem. Phys. 150, 224110 (2019)
https://doi.org/10.1063/1.5096287
Advanced Experimental Techniques
Fate of transient isomer of CH2I2: Mechanism and origin of ionic photoproducts formation unveiled by time-resolved x-ray liquidography
In Special Collection:
Ultrafast Spectroscopy and Diffraction from XUV to X-ray
Sungjun Park; Jungkweon Choi; Hosung Ki; Kyung Hwan Kim; Key Young Oang; Heegwang Roh; Joonghan Kim; Shunsuke Nozawa; Tokushi Sato; Shin-ichi Adachi; Jeongho Kim; Hyotcherl Ihee
J. Chem. Phys. 150, 224201 (2019)
https://doi.org/10.1063/1.5099002
Understanding the methyl-TROSY effect over a wide range of magnetic fields
J. Chem. Phys. 150, 224202 (2019)
https://doi.org/10.1063/1.5095757
Atoms, Molecules, and Clusters
An experimental and theoretical study of the C 1s ionization satellites in CH3I
J. Chem. Phys. 150, 224303 (2019)
https://doi.org/10.1063/1.5099699
Laser-cooling with an intermediate electronic state: Theoretical prediction on bismuth hydride
J. Chem. Phys. 150, 224305 (2019)
https://doi.org/10.1063/1.5094367
Liquids, Glasses, and Crystals
State variables for glasses: The case of amorphous ice
In Special Collection:
Chemical Physics of Supercooled Water
J. Chem. Phys. 150, 224502 (2019)
https://doi.org/10.1063/1.5092586
Thermodynamic analysis of the stability of planar interfaces between coexisting phases and its application to supercooled water
In Special Collection:
Chemical Physics of Supercooled Water
J. Chem. Phys. 150, 224503 (2019)
https://doi.org/10.1063/1.5097591
Vibrational dynamics of confined supercooled water
In Special Collection:
Chemical Physics of Supercooled Water
J. Chem. Phys. 150, 224504 (2019)
https://doi.org/10.1063/1.5094147
Spectroscopic fingerprints in the low frequency spectrum of ice (Ih), clathrate hydrates, supercooled water, and hydrophobic hydration reveal similarities in the hydrogen bond network motifs
In Special Collection:
Chemical Physics of Supercooled Water
J. Chem. Phys. 150, 224505 (2019)
https://doi.org/10.1063/1.5097218
Intermediate range O–O correlations in supercooled water down to 235 K
In Special Collection:
Chemical Physics of Supercooled Water
Harshad Pathak; Alexander Späh; Kyung Hwan Kim; Ifigeneia Tsironi; Daniel Mariedahl; Maria Blanco; Simo Huotari; Veijo Honkimäki; Anders Nilsson
J. Chem. Phys. 150, 224506 (2019)
https://doi.org/10.1063/1.5100811
Translational and rotational dynamics of high and low density TIP4P/2005 water
J. Chem. Phys. 150, 224507 (2019)
https://doi.org/10.1063/1.5079956
Effect of OH groups on the polyamorphic transition of polyol aqueous solutions
In Special Collection:
Chemical Physics of Supercooled Water
J. Chem. Phys. 150, 224508 (2019)
https://doi.org/10.1063/1.5095649
Hysteresis in the temperature dependence of the IR bending vibration of deeply cooled confined water
In Special Collection:
Chemical Physics of Supercooled Water
J. Chem. Phys. 150, 224509 (2019)
https://doi.org/10.1063/1.5096988
Surfaces, Interfaces, and Materials
Ti-Ti bond at oxygen vacancy inducing the deep defect level in anatase TiO2 (101) surface
J. Chem. Phys. 150, 224702 (2019)
https://doi.org/10.1063/1.5108595
Dynamics of proton transfer reactions on silicon surfaces: OH-dissociation of methanol and water on Si(001)
In Special Collection:
JCP Editors' Choice 2019
J. Chem. Phys. 150, 224703 (2019)
https://doi.org/10.1063/1.5092804
Polymers and Soft Matter
Stratification of drying particle suspensions: Comparison of implicit and explicit solvent simulations
J. Chem. Phys. 150, 224901 (2019)
https://doi.org/10.1063/1.5066035
A parallel algorithm to produce long polymer chains in molecular dynamics
J. Chem. Phys. 150, 224902 (2019)
https://doi.org/10.1063/1.5065785
Biological Molecules and Networks
Aggregation rate of amyloid beta peptide is controlled by beta-content in monomeric state
J. Chem. Phys. 150, 225101 (2019)
https://doi.org/10.1063/1.5096379
LETTERS TO THE EDITOR
Notes
N-loss photodissociation dynamics of N2O+(B2) near the NO+() + N(2P) dissociation limit
J. Chem. Phys. 150, 226101 (2019)
https://doi.org/10.1063/1.5096236
Errata
Erratum: “Free energy of adhesion of lipid bilayers on silica surfaces” [J. Chem. Phys. 148, 194704 (2018)]
J. Chem. Phys. 150, 229901 (2019)
https://doi.org/10.1063/1.5111197
Erratum: “A TPD-based determination of the graphite interlayer cohesion energy” [J. Chem. Phys. 149, 194701 (2018)]
Jürgen Weippert; Jakob Hauns; Julian Bachmann; Artur Böttcher; Xuelin Yao; Bo Yang; Akimitsu Narita; Klaus Müllen; Manfred M. Kappes
J. Chem. Phys. 150, 229902 (2019)
https://doi.org/10.1063/1.5109235
DeePMD-kit v2: A software package for deep potential models
Jinzhe Zeng, Duo Zhang, et al.