The machine learning (ML) method emerges as an efficient and precise surrogate model for high-level electronic structure theory. Its application has been limited to closed chemical systems without considering external potentials from the surrounding environment. To address this limitation and incorporate the influence of external potentials, polarization effects, and long-range interactions between a chemical system and its environment, the first two terms of the Taylor expansion of an electrostatic operator have been used as extra input to the existing ML model to represent the electrostatic environments. However, high-order electrostatic interaction is often essential to account for external potentials from the environment. The existing models based only on invariant features cannot capture significant distribution patterns of the external potentials. Here, we propose a novel ML model that includes high-order terms of the Taylor expansion of an electrostatic operator and uses an equivariant model, which can generate a high-order tensor covariant with rotations as a base model. Therefore, we can use the multipole-expansion equation to derive a useful representation by accounting for polarization and intermolecular interaction. Moreover, to deal with long-range interactions, we follow the same strategy adopted to derive long-range interactions between a target system and its environment media. Our model achieves higher prediction accuracy and transferability among various environment media with these modifications.
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7 June 2024
Research Article|
June 03 2024
Learning QM/MM potential using equivariant multiscale model
Yao-Kun Lei
;
Yao-Kun Lei
(Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing)
1
Theoretical Molecular Science Laboratory, RIKEN Cluster for Pioneering Research
, Wako, Saitama 351-0198, Japan
2
Computational Biophysics Research Team, RIKEN Center for Computational Science
, Kobe, Hyogo 650-0047, Japan
3
RIKEN Interdisciplinary Theoretical and Mathematical Sciences Program (iTHEMS)
, Wako, Saitama 351-0198, Japan
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Kiyoshi Yagi
;
Kiyoshi Yagi
(Conceptualization, Funding acquisition, Methodology, Software, Supervision, Validation, Writing – review & editing)
1
Theoretical Molecular Science Laboratory, RIKEN Cluster for Pioneering Research
, Wako, Saitama 351-0198, Japan
2
Computational Biophysics Research Team, RIKEN Center for Computational Science
, Kobe, Hyogo 650-0047, Japan
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Yuji Sugita
Yuji Sugita
a)
(Conceptualization, Funding acquisition, Project administration, Resources, Supervision, Writing – review & editing)
1
Theoretical Molecular Science Laboratory, RIKEN Cluster for Pioneering Research
, Wako, Saitama 351-0198, Japan
2
Computational Biophysics Research Team, RIKEN Center for Computational Science
, Kobe, Hyogo 650-0047, Japan
3
RIKEN Interdisciplinary Theoretical and Mathematical Sciences Program (iTHEMS)
, Wako, Saitama 351-0198, Japan
4
Laboratory for Biomolecular Function Simulation, RIKEN Center for Biosystems Dynamics Research
, Kobe, Hyogo 650-0047, Japan
a)Author to whom correspondence should be addressed: [email protected]
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a)Author to whom correspondence should be addressed: [email protected]
J. Chem. Phys. 160, 214109 (2024)
Article history
Received:
February 24 2024
Accepted:
May 09 2024
Citation
Yao-Kun Lei, Kiyoshi Yagi, Yuji Sugita; Learning QM/MM potential using equivariant multiscale model. J. Chem. Phys. 7 June 2024; 160 (21): 214109. https://doi.org/10.1063/5.0205123
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