Modeling the ion concentration profile in nanochannel plays an important role in understanding the electrical double layer and electro-osmotic flow. Due to the non-negligible surface interaction and the effect of discrete solvent molecules, molecular dynamics (MD) simulation is often used as an essential tool to study the behavior of ions under nanoconfinement. Despite the accuracy of MD simulation in modeling nanoconfinement systems, it is computationally expensive. In this work, we propose neural network to predict ion concentration profiles in nanochannels with different configurations, including channel widths, ion molarity, and ion types. By modeling the ion concentration profile as a probability distribution, our neural network can serve as a much faster surrogate model for MD simulation with high accuracy. We further demonstrate the superior prediction accuracy of neural network over XGBoost. Finally, we demonstrated that neural network is flexible in predicting ion concentration profiles with different bin sizes. Overall, our deep learning model is a fast, flexible, and accurate surrogate model to predict ion concentration profiles in nanoconfinement.
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7 September 2023
Research Article|
September 01 2023
Neural network predicts ion concentration profiles under nanoconfinement
Special Collection:
Machine Learning Hits Molecular Simulations
Zhonglin Cao
;
Zhonglin Cao
(Conceptualization, Data curation, Investigation, Methodology, Visualization, Writing – original draft, Writing – review & editing)
1
Department of Mechanical Engineering, Carnegie Mellon University
, Pittsburgh, Pennsylvania 15213, USA
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Yuyang Wang
;
Yuyang Wang
(Conceptualization, Investigation, Methodology, Writing – original draft, Writing – review & editing)
1
Department of Mechanical Engineering, Carnegie Mellon University
, Pittsburgh, Pennsylvania 15213, USA
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Cooper Lorsung
;
Cooper Lorsung
(Methodology, Software, Writing – original draft, Writing – review & editing)
1
Department of Mechanical Engineering, Carnegie Mellon University
, Pittsburgh, Pennsylvania 15213, USA
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Amir Barati Farimani
Amir Barati Farimani
(Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Supervision, Writing – review & editing)
1
Department of Mechanical Engineering, Carnegie Mellon University
, Pittsburgh, Pennsylvania 15213, USA
2
Department of Chemical Engineering, Carnegie Mellon University
, Pittsburgh, Pennsylvania 15213, USA
3
Machine Learning Department, Carnegie Mellon University
, Pittsburgh, Pennsylvania 15213, USA
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a)
Author to whom correspondence should be addressed: barati@cmu.edu
J. Chem. Phys. 159, 094702 (2023)
Article history
Received:
February 19 2023
Accepted:
June 23 2023
Citation
Zhonglin Cao, Yuyang Wang, Cooper Lorsung, Amir Barati Farimani; Neural network predicts ion concentration profiles under nanoconfinement. J. Chem. Phys. 7 September 2023; 159 (9): 094702. https://doi.org/10.1063/5.0147119
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