Knowledge of the electronic stopping curve for swift ions, Se(v), particularly around the Bragg peak, is important for understanding radiation damage. Experimentally, however, the determination of such a feature for light ions is very challenging, especially in disordered systems such as liquid water and biological tissue. Recent developments in real-time time-dependent density functional theory (rt-TDDFT) have enabled the calculation of Se(v) along nm-sized trajectories. However, it is still a challenge to obtain a meaningful statistically averaged Se(v) that can be compared to observations. In this work, taking advantage of the correlation between the local electronic structure probed by the projectile and the distance from the projectile to the atoms in the target, we devise a trajectory pre-sampling scheme to select, geometrically, a small set of short trajectories to accelerate the convergence of the averaged Se(v) computed via rt-TDDFT. For protons in liquid water, we first calculate the reference probability distribution function (PDF) for the distance from the proton to the closest oxygen atom, ϕR(rp→O), for a trajectory of a length similar to those sampled experimentally. Then, short trajectories are sequentially selected so that the accumulated PDF reproduces ϕR(rp→O) to increasingly high accuracy. Using these pre-sampled trajectories, we demonstrate that the averaged Se(vp) converges in the whole velocity range with less than eight trajectories, while other averaging methods using randomly and uniformly distributed trajectories require approximately ten times the computational effort. This allows us to compare the Se(vp) curve to experimental data and assess widely used empirical tables based on Bragg’s rule.
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21 July 2020
Research Article|
July 20 2020
Efficient ab initio calculation of electronic stopping in disordered systems via geometry pre-sampling: Application to liquid water
Bin Gu
;
Bin Gu
1
Department of Physics, Nanjing University of Information Science and Technology
, Nanjing 210044, China
2
Atomistic Simulation Centre, Queen’s University Belfast
, Belfast BT71NN, Northern Ireland, United Kingdom
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Brian Cunningham
;
Brian Cunningham
2
Atomistic Simulation Centre, Queen’s University Belfast
, Belfast BT71NN, Northern Ireland, United Kingdom
3
Centre for Theoretical Atomic, Molecular and Optical Physics, Queen’s University Belfast
, Belfast BT71NN, Northern Ireland, United Kingdom
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Daniel Muñoz Santiburcio
;
Daniel Muñoz Santiburcio
4
CIC Nanogune BRTA
, Tolosa Hiribidea 76, 20018 San Sebastian, Spain
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Fabiana Da Pieve
;
Fabiana Da Pieve
5
Royal Belgian Institute for Space Aeronomy
, Av Circulaire 3, 1180 Brussels, Belgium
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Emilio Artacho
;
Emilio Artacho
4
CIC Nanogune BRTA
, Tolosa Hiribidea 76, 20018 San Sebastian, Spain
6
Donostia International Physics Center (DIPC)
, Paseo Manuel de Lardizabal 4, 20018 San Sebastian, Spain
7
Ikerbasque, Basque Foundation for Science
, 48011 Bilbao, Spain
8
Theory of Condensed Matter, Cavendish Laboratory, University of Cambridge
, Cambridge CB3 0HE, United Kingdom
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Jorge Kohanoff
Jorge Kohanoff
a)
2
Atomistic Simulation Centre, Queen’s University Belfast
, Belfast BT71NN, Northern Ireland, United Kingdom
a)Author to whom correspondence should be addressed: j.kohanoff@qub.ac.uk
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a)Author to whom correspondence should be addressed: j.kohanoff@qub.ac.uk
J. Chem. Phys. 153, 034113 (2020)
Article history
Received:
May 18 2020
Accepted:
July 02 2020
Citation
Bin Gu, Brian Cunningham, Daniel Muñoz Santiburcio, Fabiana Da Pieve, Emilio Artacho, Jorge Kohanoff; Efficient ab initio calculation of electronic stopping in disordered systems via geometry pre-sampling: Application to liquid water. J. Chem. Phys. 21 July 2020; 153 (3): 034113. https://doi.org/10.1063/5.0014276
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