We present a method for accelerating the global structure optimization of atomic compounds. The method is demonstrated to speed up the finding of the anatase TiO2(001)-(1 × 4) surface reconstruction within a density functional tight-binding theory framework using an evolutionary algorithm. As a key element of the method, we use unsupervised machine learning techniques to categorize atoms present in a diverse set of partially disordered surface structures into clusters of atoms having similar local atomic environments. Analysis of more than 1000 different structures shows that the total energy of the structures correlates with the summed distances of the atomic environments to their respective cluster centers in feature space, where the sum runs over all atoms in each structure. Our method is formulated as a gradient based minimization of this summed cluster distance for a given structure and alternates with a standard gradient based energy minimization. While the latter minimization ensures local relaxation within a given energy basin, the former enables escapes from meta-stable basins and hence increases the overall performance of the global optimization.
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Accelerating atomic structure search with cluster regularization
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28 June 2018
Research Article|
May 29 2018
Accelerating atomic structure search with cluster regularization
Special Collection:
Data-Enabled Theoretical Chemistry
K. H. Sørensen
;
K. H. Sørensen
Department of Physics and Astronomy, and Interdisciplinary Nanoscience Center (iNANO), Aarhus University
, DK-8000 Aarhus C, Denmark
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M. S. Jørgensen
;
M. S. Jørgensen
Department of Physics and Astronomy, and Interdisciplinary Nanoscience Center (iNANO), Aarhus University
, DK-8000 Aarhus C, Denmark
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A. Bruix;
A. Bruix
Department of Physics and Astronomy, and Interdisciplinary Nanoscience Center (iNANO), Aarhus University
, DK-8000 Aarhus C, Denmark
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a)
Electronic mail: hammer@phys.au.dk
J. Chem. Phys. 148, 241734 (2018)
Article history
Received:
January 26 2018
Accepted:
May 02 2018
Citation
K. H. Sørensen, M. S. Jørgensen, A. Bruix, B. Hammer; Accelerating atomic structure search with cluster regularization. J. Chem. Phys. 28 June 2018; 148 (24): 241734. https://doi.org/10.1063/1.5023671
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