Using Molecular Dynamics simulations, we study the force-induced detachment of a coarse-grained model polymer chain from an adhesive substrate. One of the chain ends is thereby pulled at constant speed off the attractive substrate and the resulting saw-tooth profile of the measured mean force ⟨f⟩ vs height D of the end-segment over the plane is analyzed for a broad variety of parameters. It is shown that the observed characteristic oscillations in the ⟨f⟩-D profile depend on the bending and not on the torsional stiffness of the detached chains. Allowing for the presence of hydrodynamic interactions (HI) in a setup with explicit solvent and dissipative particle dynamics-thermostat, rather than the case of Langevin thermostat, one finds that HI have little effect on the ⟨f⟩-D profile. Also the change of substrate affinity with respect to the solvent from solvophilic to solvophobic is found to play negligible role in the desorption process. In contrast, a changing ratio

$\epsilon _s^B / \epsilon _s^A$
εsB/εsA of the binding energies of A- and B-segments in the detachment of an AB-copolymer from adhesive surface strongly changes the ⟨f⟩-D profile whereby the B-spikes vanish when
$\epsilon _s^B / \epsilon _s^A < 0.15$
εsB/εsA<0.15
. Eventually, performing an atomistic simulation of (bio)-polymers, we demonstrate that the simulation results, derived from our coarse-grained model, comply favorably with those from the all-atom simulation.

1.
R.
Merkel
,
Phys. Rep.
346
,
343
(
2001
).
2.
F.
Ritort
,
J. Phys.: Condens. Matter
18
,
R531
(
2006
).
3.
I.
Franco
,
M. A.
Ratner
, and
G. C.
Scatz
, “
Single-molecule pulling: Phenomenology and interpretation
,” in
Nano and Cell Mechanics: Fundamentals and Frontiers
,
Microsystem and Nanotechnology Series
(
Wiley
,
2013
), Chap. 14, pp.
359
388
.
4.
E.
Lindahl
,
B.
Hess
, and
D.
van
der Spoel,
J. Mol. Model.
7
,
306
(
2001
).
5.
G. I.
Bell
,
Science
200
,
618
(
1978
).
6.
E.
Evans
and
K.
Ritchie
,
Biophys. J.
72
,
1541
(
1997
).
7.
E.
Evans
,
Annu. Rev. Biophys. Biomol. Struct.
30
,
105
(
2001
).
8.
Atomic Force Microscopy in Liquid: Biological Applications
, edited by
A. M.
Baró
and
R. G.
Reifenberger
(
Wiley-VCH Verlag & Co. KGaA
,
Weinheim
,
2012
).
9.
R.
Merkel
,
P.
Nassoy
,
K.
Ritchi
, and
E.
Evans
,
Nature (London)
397
,
50
(
1999
).
10.
S.
Manohar
and
A.
Jagota
,
Phys. Rev. E
81
,
021805
(
2010
).
11.
S.
Manohar
,
A. R.
Manz
,
K. E.
Bancroft
,
Ch.-Y.
Hui
,
A.
Jagota
, and
D. V.
Vezenov
,
Nano. Lett.
8
,
4365
(
2008
).
12.
S.
Iliafar
,
D. V.
Vezenov
, and
A.
Jagota
,
Langmuir
29
,
1435
(
2013
).
13.
S.
Iliafar
,
K.
Wagner
,
S.
Manohar
,
A.
Jagota
, and
D. V.
Vezenov
,
J. Phys. Chem. C
116
,
13896
(
2012
).
14.
J.
Paturej
,
J. L. A.
Dubbeldam
,
V. G.
Rostiashvili
,
A.
Milchev
, and
T.
Vilgis
,
Soft Matter
10
,
2785
(
2014
).
15.
K.
Kremer
and
G. S.
Grest
,
J. Chem. Phys.
92
,
5057
(
1990
).
16.
T.
Schneider
and
E.
Stoll
,
Phys. Rev. B
17
,
1302
(
1978
).
17.
R. D.
Groot
and
P. B.
Warren
,
J. Chem. Phys.
107
,
4423
(
1997
).
18.
I.
Pagonabarraga
,
M. H. J.
Hagen
, and
D.
Frenkel
,
EPL
42
,
377
(
1998
).
19.
T.
Sodemann
,
B.
Dünweg
, and
K.
Kremer
,
Phys. Rev. E
68
,
046702
(
2003
).
20.
S. J.
Plimpton
,
J. Comput. Phys.
117
,
1
(
1995
).
21.
A. Yu.
Grosberg
and
A. R.
Khokhlov
,
Statistical Physics of Macromolecules
(
AIP Press
,
New York
,
1994
).
22.
W. R. P.
Scott
,
P. H.
Hünenberger
,
I. G.
Tironi
,
A. E.
Mark
,
S. R.
Billeter
,
J.
Fennen
,
A. E.
Torda
,
T.
Huber
,
P.
Krüger
, and
W. F.
van Gunsteren
,
J. Phys. Chem. A
103
,
3596
(
1999
).
23.
H. J. C.
Berendsen
,
J. R.
Grigera
, and
T. P.
Straatsma
,
J. Phys. Chem.
91
,
6269
(
1987
).
24.
K. A.
Feenstra
,
B.
Hess
, and
H. J. S.
Berendsen
,
J. Comput. Chem.
20
,
786
(
1999
).
25.
T.
Darden
,
D.
York
, and
L.
Pedersen
,
J. Chem. Phys.
98
,
10089
(
1993
).
26.
D.
Horinek
,
A.
Serr
,
M.
Geisler
,
T.
Pirzer
,
U.
Slotta
,
S. Q.
Lud
,
J. A.
Garrido
,
T.
Scheibel
,
T.
Hugel
, and
R. R.
Netz
,
Proc. Natl. Acad. Sci. U.S.A.
105
,
2842
(
2008
).
27.
A.
Winkler
,
P.
Virnau
,
K.
Binder
,
R. G.
Winkler
, and
G.
Gompper
,
Europhys. Lett.
100
,
46003
(
2012
).
28.
C.
Vanderzande
,
Lattice Model of Polymer
(
Cambridge University Press
,
Cambridge
,
2004
).
29.
J.
Paturej
,
A.
Milchev
,
V. G.
Rostiashvili
, and
T. A.
Vilgis
,
Macromolecules
45
,
4371
(
2012
).
30.
F.
Sedlmeier
 et al,
Biointerphases
3
,
23
39
(
2008
).
31.
A.
Erbas
,
D.
Horinek
, and
R. R.
Netz
,
J. Am. Chem. Soc.
134
,
623
(
2012
).
32.
N.
Schwierz
 et al,
J. Am. Chem. Soc.
134
,
19628
19638
(
2012
).
You do not currently have access to this content.