The inner shell excitation of pyrimidine and some halogenated pyrimidines near the C and N K-edges has been investigated experimentally by near edge x-ray absorption fine structure spectroscopy and theoretically by density functional theory calculations. The selected targets, 5-Br-pyrimidine, 2-Br-pyrimidine, 2-Cl-pyrimidine, and 5-Br-2-Cl-pyrimidine, allow the effects of the functionalization of the pyrimidine ring to be studied either as a function of different halogen atoms bound to the same molecular site or as a function of the same halogen atom bound to different molecular sites. The results show that the individual characteristics of the different spectra of the substituted pyrimidines can be rationalized in terms of variations in electronic and geometrical structures of the molecule depending on the localization and the electronegativity of the substituent.
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21 July 2010
Research Article|
July 19 2010
Pyrimidine and halogenated pyrimidines near edge x-ray absorption fine structure spectra at C and N K-edges: experiment and theory Available to Purchase
P. Bolognesi;
P. Bolognesi
a)
1
CNR-IMIP
, Area della Ricerca di Roma 1, Monterotondo Scalo 00016, Italy
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P. O’Keeffe;
P. O’Keeffe
1
CNR-IMIP
, Area della Ricerca di Roma 1, Monterotondo Scalo 00016, Italy
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Y. Ovcharenko;
Y. Ovcharenko
b)
1
CNR-IMIP
, Area della Ricerca di Roma 1, Monterotondo Scalo 00016, Italy
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M. Coreno;
M. Coreno
1
CNR-IMIP
, Area della Ricerca di Roma 1, Monterotondo Scalo 00016, Italy
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L. Avaldi;
L. Avaldi
1
CNR-IMIP
, Area della Ricerca di Roma 1, Monterotondo Scalo 00016, Italy
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V. Feyer;
V. Feyer
2
Sincrotrone Trieste
, Area Science Park, 3402 Basovizza (Trieste), Italy
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O. Plekan;
O. Plekan
c)
2
Sincrotrone Trieste
, Area Science Park, 3402 Basovizza (Trieste), Italy
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K. C. Prince;
K. C. Prince
2
Sincrotrone Trieste
, Area Science Park, 3402 Basovizza (Trieste), Italy
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W. Zhang;
W. Zhang
d)
3
CNR-IPCF
, Area della Ricerca di Pisa, via Moruzzi 1, 56124 Pisa, Italy
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V. Carravetta
V. Carravetta
3
CNR-IPCF
, Area della Ricerca di Pisa, via Moruzzi 1, 56124 Pisa, Italy
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P. Bolognesi
1,a)
P. O’Keeffe
1
Y. Ovcharenko
1,b)
M. Coreno
1
L. Avaldi
1
V. Feyer
2
O. Plekan
2,c)
K. C. Prince
2
W. Zhang
3,d)
V. Carravetta
3
1
CNR-IMIP
, Area della Ricerca di Roma 1, Monterotondo Scalo 00016, Italy
2
Sincrotrone Trieste
, Area Science Park, 3402 Basovizza (Trieste), Italy
3
CNR-IPCF
, Area della Ricerca di Pisa, via Moruzzi 1, 56124 Pisa, Italy
a)
Electronic mail: [email protected].
b)
Permanent address: Institute of Electron Physics, Uzhgorod, Ukraine.
c)
Department of Physics and Astronomy, Aarhus University, Aarhus, Denmark.
d)
Hefei National Laboratory for Physical Science at the Microscale, University of Science and Technology of China, Hefei, China.
J. Chem. Phys. 133, 034302 (2010)
Article history
Received:
March 22 2010
Accepted:
May 10 2010
Citation
P. Bolognesi, P. O’Keeffe, Y. Ovcharenko, M. Coreno, L. Avaldi, V. Feyer, O. Plekan, K. C. Prince, W. Zhang, V. Carravetta; Pyrimidine and halogenated pyrimidines near edge x-ray absorption fine structure spectra at C and N K-edges: experiment and theory. J. Chem. Phys. 21 July 2010; 133 (3): 034302. https://doi.org/10.1063/1.3442489
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