We construct an accurate error estimate for the root mean square force error of the smooth particle mesh Ewald (SPME) algorithm, which is often used for molecular dynamics simulations, where charge configurations under periodic boundary conditions require considerable amounts of CPU time. The error estimates are provided for the - as well as analytical force differentiation schemes, and their validity is tested for a random homogeneous sample system. Finally, we demonstrate that it is possible to straightforwardly and precisely determine the SPME parameters via the error estimates prior to the simulation for a predetermined accuracy. This can save precious computer and user time and allows an easy choice of a suitable parameter set for nearly optimal speed.
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21 July 2010
Research Article|
July 20 2010
Optimizing working parameters of the smooth particle mesh Ewald algorithm in terms of accuracy and efficiency
Han Wang;
Han Wang
a)
1LMAM and School of Mathematical Sciences,
Peking University
, Beijing 100871, China
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Florian Dommert;
Florian Dommert
2Institute for Computational Physics,
University Stuttgart
, Stuttgart, Pfaffenwaldring 27, 70569 Stuttgart, Germany
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Christian Holm
Christian Holm
2Institute for Computational Physics,
University Stuttgart
, Stuttgart, Pfaffenwaldring 27, 70569 Stuttgart, Germany
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Han Wang
1,a)
Florian Dommert
2
Christian Holm
2
1LMAM and School of Mathematical Sciences,
Peking University
, Beijing 100871, China
2Institute for Computational Physics,
University Stuttgart
, Stuttgart, Pfaffenwaldring 27, 70569 Stuttgart, Germany
a)
Electronic mail: [email protected].
J. Chem. Phys. 133, 034117 (2010)
Article history
Received:
February 23 2010
Accepted:
May 16 2010
Citation
Han Wang, Florian Dommert, Christian Holm; Optimizing working parameters of the smooth particle mesh Ewald algorithm in terms of accuracy and efficiency. J. Chem. Phys. 21 July 2010; 133 (3): 034117. https://doi.org/10.1063/1.3446812
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