Transport of metabolites between cells and between subcellular compartments is facilitated by special protein channels that form aqueous pores traversing biological membranes. Accumulating evidence demonstrates that solute-specific channels display pronounced binding to the corresponding solutes. In this paper we rationalize this observation by showing that a wide and deep potential well inside the channel is able to greatly increase the transit probability of the particle through the channel. Using a one-dimensional diffusion model with radiation boundary conditions, we give exact analytical expressions for the particle translocation probabilities. We also run Brownian dynamics simulations to verify the model and the quantitative predictions of our theory.
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8 June 2002
Research Article|
June 08 2002
Channel-facilitated membrane transport: Transit probability and interaction with the channel Available to Purchase
Alexander M. Berezhkovskii;
Alexander M. Berezhkovskii
Mathematical and Statistical Computing Laboratory, CIT, National Institutes of Health, Bethesda, Maryland 20892
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Mark A. Pustovoit;
Mark A. Pustovoit
St. Petersburg Nuclear Physics Institute, Gatchina, 188350 Russia
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Sergey M. Bezrukov
Sergey M. Bezrukov
St. Petersburg Nuclear Physics Institute, Gatchina, 188350 Russia
Laboratory of Physical and Structural Biology, NICHD, National Institutes of Health, Bethesda, Maryland 20892
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Alexander M. Berezhkovskii
Mark A. Pustovoit
Sergey M. Bezrukov
,
Mathematical and Statistical Computing Laboratory, CIT, National Institutes of Health, Bethesda, Maryland 20892
J. Chem. Phys. 116, 9952–9956 (2002)
Article history
Received:
January 11 2002
Accepted:
March 11 2002
Citation
Alexander M. Berezhkovskii, Mark A. Pustovoit, Sergey M. Bezrukov; Channel-facilitated membrane transport: Transit probability and interaction with the channel. J. Chem. Phys. 8 June 2002; 116 (22): 9952–9956. https://doi.org/10.1063/1.1475758
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