The fluorescence quantum yield parameter in Förster resonance energy transfer (FRET) processes underpins vital phenomena ranging from light harvesting in photosynthesis to design of sensors for monitoring physiological processes. The criteria for choosing a donor for use in FRET processes include chemical features (solubility, bioconjugatability, synthetic accessibility, and stability) as well as photophysical properties pertaining to absorption (wavelength and molar absorption coefficient) and fluorescence (wavelength and fluorescence quantum yield). The value of the donor fluorescence quantum yield (Φf, or emphatically, Φf(D)) alone has sometimes been thought (erroneously) to place a ceiling on the possible quantum yield of energy transfer (Φtrans). A high value of the donor Φf, while attractive, is not at all essential; indeed, many valuable candidates for use as FRET donors have likely been excluded on the basis of this injudiciously applied filter. Such disregard is unwarranted. In this tutorial overview, the equations for FRET are reviewed along with pertinent core concepts in photophysics. An analogy using simple hydraulics provides a pedagogical tool for the non-aficionado to better understand photochemical kinetics. Ten examples are presented of donor–acceptor systems with donors that exhibit a range of Φf values (0.60, 0.59. 0.21, 0.17, 0.12, 0.118, 0.04, 0.018, 0.007, and 0.003; i.e., 60%–0.3%), yet for each corresponding donor–acceptor pair, the value of Φtrans is at least 0.70 and in some cases nearly 1.00 (i.e., 70%–100%). The systems encompass protein, synthetic inorganic, and synthetic organic architectures. The objectives of this illustrative review are to deepen understanding of FRET and to broaden molecular design considerations by enabling selection from among a far richer set of donors for use in FRET processes.
Skip Nav Destination
The fluorescence quantum yield parameter in Förster resonance energy transfer (FRET)—Meaning, misperception, and molecular design
,
,
,
CHORUS
Article navigation
March 2021
Review Article|
March 26 2021
The fluorescence quantum yield parameter in Förster resonance energy transfer (FRET)—Meaning, misperception, and molecular design
Available to Purchase
Jonathan S. Lindsey
;
Jonathan S. Lindsey
a)
1
Department of Chemistry, North Carolina State University
, Raleigh, North Carolina 27695-8204, USA
a)Authors to whom correspondence should be addressed: [email protected]. Tel.: 919-515-6406; Fax: 1-919-513-2830; URL: https://chemistry.sciences.ncsu.edu/people/jslindse. [email protected]. Tel.: 919-355-5353. [email protected]. Tel.: 951-827-3660; URL: https://profiles.ucr.edu/david.bocian. [email protected]. Tel.: 314-935-6502; URL: https://artsci.wustl.edu/faculty-staff/dewey-holten
Search for other works by this author on:
Masahiko Taniguchi
;
Masahiko Taniguchi
a)
1
Department of Chemistry, North Carolina State University
, Raleigh, North Carolina 27695-8204, USA
a)Authors to whom correspondence should be addressed: [email protected]. Tel.: 919-515-6406; Fax: 1-919-513-2830; URL: https://chemistry.sciences.ncsu.edu/people/jslindse. [email protected]. Tel.: 919-355-5353. [email protected]. Tel.: 951-827-3660; URL: https://profiles.ucr.edu/david.bocian. [email protected]. Tel.: 314-935-6502; URL: https://artsci.wustl.edu/faculty-staff/dewey-holten
Search for other works by this author on:
David F. Bocian
;
David F. Bocian
a)
2
Department of Chemistry, University of California
, Riverside, California 92521-0403, USA
a)Authors to whom correspondence should be addressed: [email protected]. Tel.: 919-515-6406; Fax: 1-919-513-2830; URL: https://chemistry.sciences.ncsu.edu/people/jslindse. [email protected]. Tel.: 919-355-5353. [email protected]. Tel.: 951-827-3660; URL: https://profiles.ucr.edu/david.bocian. [email protected]. Tel.: 314-935-6502; URL: https://artsci.wustl.edu/faculty-staff/dewey-holten
Search for other works by this author on:
Dewey Holten
Dewey Holten
a)
3
Department of Chemistry, Washington University
, St. Louis, Missouri 63130-4889, USA
a)Authors to whom correspondence should be addressed: [email protected]. Tel.: 919-515-6406; Fax: 1-919-513-2830; URL: https://chemistry.sciences.ncsu.edu/people/jslindse. [email protected]. Tel.: 919-355-5353. [email protected]. Tel.: 951-827-3660; URL: https://profiles.ucr.edu/david.bocian. [email protected]. Tel.: 314-935-6502; URL: https://artsci.wustl.edu/faculty-staff/dewey-holten
Search for other works by this author on:
Jonathan S. Lindsey
1,a)
Masahiko Taniguchi
1,a)
David F. Bocian
2,a)
Dewey Holten
3,a)
1
Department of Chemistry, North Carolina State University
, Raleigh, North Carolina 27695-8204, USA
2
Department of Chemistry, University of California
, Riverside, California 92521-0403, USA
3
Department of Chemistry, Washington University
, St. Louis, Missouri 63130-4889, USA
a)Authors to whom correspondence should be addressed: [email protected]. Tel.: 919-515-6406; Fax: 1-919-513-2830; URL: https://chemistry.sciences.ncsu.edu/people/jslindse. [email protected]. Tel.: 919-355-5353. [email protected]. Tel.: 951-827-3660; URL: https://profiles.ucr.edu/david.bocian. [email protected]. Tel.: 314-935-6502; URL: https://artsci.wustl.edu/faculty-staff/dewey-holten
Chem. Phys. Rev. 2, 011302 (2021)
Article history
Received:
December 19 2020
Accepted:
February 19 2021
Citation
Jonathan S. Lindsey, Masahiko Taniguchi, David F. Bocian, Dewey Holten; The fluorescence quantum yield parameter in Förster resonance energy transfer (FRET)—Meaning, misperception, and molecular design. Chem. Phys. Rev. 1 March 2021; 2 (1): 011302. https://doi.org/10.1063/5.0041132
Download citation file:
Pay-Per-View Access
$40.00
Sign In
You could not be signed in. Please check your credentials and make sure you have an active account and try again.
Citing articles via
Applications of machine learning in surfaces and interfaces
Shaofeng Xu, Jingyuan Wu, et al.
Recent progress in the theory of bulk photovoltaic effect
Zhenbang Dai, Andrew M. Rappe
Embrace the darkness: An experimental perspective on organic exciton–polaritons
Thomas Khazanov, Suman Gunasekaran, et al.
Related Content
Unraveling multi-state molecular dynamics in single-molecule FRET experiments. I. Theory of FRET-lines
J. Chem. Phys. (April 2022)
Solvent effect on FRET spectroscopic ruler
J. Chem. Phys. (March 2018)
Dependence of FRET efficiency on distance in single donor-acceptor pairs
J. Chem. Phys. (March 2015)
Inferring properties of disordered chains from FRET transfer efficiencies
J. Chem. Phys. (February 2018)