Inferring the dependence structure of complex networks from the observation of the non-linear dynamics of its components is among the common, yet far from resolved challenges faced when studying real-world complex systems. While a range of methods using the ordinal patterns framework has been proposed to particularly tackle the problem of dependence inference in the presence of non-linearity, they come with important restrictions in the scope of their application. Hereby, we introduce the sign patterns as an extension of the ordinal patterns, arising from a more flexible symbolization which is able to encode longer sequences with lower number of symbols. After transforming time series into sequences of sign patterns, we derive improved estimates for statistical quantities by considering necessary constraints on the probabilities of occurrence of combinations of symbols in a symbolic process with prohibited transitions. We utilize these to design an asymptotic chi-squared test to evaluate dependence between two time series and then apply it to the construction of climate networks, illustrating that the developed method can capture both linear and non-linear dependences, while avoiding bias present in the naive application of the often used Pearson correlation coefficient or mutual information.
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Sign patterns symbolization and its use in improved dependence test for complex network inference
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August 2023
Research Article|
August 17 2023
Sign patterns symbolization and its use in improved dependence test for complex network inference
Arthur Matsuo Yamashita Rios de Sousa
;
(Conceptualization, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing)
1
Institute of Computer Science of the Czech Academy of Sciences
, Prague 182 07, Czech Republic
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Jaroslav Hlinka
(Conceptualization, Funding acquisition, Methodology, Project administration, Resources, Supervision, Writing – review & editing)
1
Institute of Computer Science of the Czech Academy of Sciences
, Prague 182 07, Czech Republic
2
National Institute of Mental Health
, Klecany 250 67, Czech Republic
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b)
Present address: School of Computing, Tokyo Institute of Technology, Yokohama 226-8502, Japan.
Chaos 33, 083131 (2023)
Article history
Received:
June 06 2023
Accepted:
July 22 2023
Citation
Arthur Matsuo Yamashita Rios de Sousa, Jaroslav Hlinka; Sign patterns symbolization and its use in improved dependence test for complex network inference. Chaos 1 August 2023; 33 (8): 083131. https://doi.org/10.1063/5.0160868
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