We illustrate relationships between classical kernel-based dimensionality reduction techniques and eigendecompositions of empirical estimates of reproducing kernel Hilbert space operators associated with dynamical systems. In particular, we show that kernel canonical correlation analysis (CCA) can be interpreted in terms of kernel transfer operators and that it can be obtained by optimizing the variational approach for Markov processes score. As a result, we show that coherent sets of particle trajectories can be computed by kernel CCA. We demonstrate the efficiency of this approach with several examples, namely, the well-known Bickley jet, ocean drifter data, and a molecular dynamics problem with a time-dependent potential. Finally, we propose a straightforward generalization of dynamic mode decomposition called coherent mode decomposition. Our results provide a generic machine learning approach to the computation of coherent sets with an objective score that can be used for cross-validation and the comparison of different methods.
Skip Nav Destination
Article navigation
December 2019
Research Article|
December 11 2019
Kernel methods for detecting coherent structures in dynamical data
Stefan Klus;
Stefan Klus
a)
1
Department of Mathematics and Computer Science, Freie Universität Berlin
, 14195 Berlin, Germany
Search for other works by this author on:
Brooke E. Husic
;
Brooke E. Husic
b)
1
Department of Mathematics and Computer Science, Freie Universität Berlin
, 14195 Berlin, Germany
2
Department of Chemistry, Stanford University
, Stanford, California 94305, USA
Search for other works by this author on:
Mattes Mollenhauer;
Mattes Mollenhauer
c)
1
Department of Mathematics and Computer Science, Freie Universität Berlin
, 14195 Berlin, Germany
Search for other works by this author on:
Chaos 29, 123112 (2019)
Article history
Received:
April 18 2019
Accepted:
November 08 2019
Citation
Stefan Klus, Brooke E. Husic, Mattes Mollenhauer, Frank Noé; Kernel methods for detecting coherent structures in dynamical data. Chaos 1 December 2019; 29 (12): 123112. https://doi.org/10.1063/1.5100267
Download citation file:
Sign in
Don't already have an account? Register
Sign In
You could not be signed in. Please check your credentials and make sure you have an active account and try again.
Sign in via your Institution
Sign in via your InstitutionPay-Per-View Access
$40.00
Citing articles via
Related Content
On the evolution of near-singular modes of the Bickley jet
Physics of Fluids (September 1999)
Quasi-objective eddy visualization from sparse drifter data
Chaos (November 2022)
Weather observations using autonomous acoustic drifters
J Acoust Soc Am (October 1992)
Leaching from CCA‐Treated Wood into Soils: Preliminary PIXE Studies
AIP Conference Proceedings (August 2003)