Single molecule localization microscopy relies on the precise quantification of the position of single dye emitters in a sample. This precision is improved by the number of photons that can be detected from each molecule. Particularly recording at cryogenic temperatures dramatically reduces photobleaching and would, hence, in principle, allow the user to massively increase the illumination time to several seconds. The downside of long illuminations, however, would be image blur due to inevitable jitter or drift occurring during the illuminations, which deteriorates the localization precision. In this paper, we theoretically demonstrate that a parallel recording of the fiducial marker beads together with a fitting approach accounting for the full drift trajectory allows for largely eliminating drift effects for drift magnitudes of several hundred nanometers per frame. We showcase the method for linear and diffusional drift as well as oscillations, assuming fixed dipole orientations during each illumination.
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10 July 2023
Research Article|
July 13 2023
Localization of fixed dipoles at high precision by accounting for sample drift during illumination
Special Collection:
Advances in Optical Microscopy for Bioimaging
Fabian Hinterer
;
Fabian Hinterer
a)
(Conceptualization, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing)
1
Johannes Kepler University, Institute of Industrial Mathematics
, Linz, Austria
a)Authors to whom correspondence should be addressed: fabian.hinterer@indmath.uni-linz.ac.at and schneiderm2@hhmi.org
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Magdalena C. Schneider
;
Magdalena C. Schneider
a)
(Conceptualization, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing)
2
TU Wien, Institute of Applied Physics
, Vienna, Austria
3
Janelia Research Campus, Howard Hughes Medical Institute
, Ashburn, Virginia 20147, USA
a)Authors to whom correspondence should be addressed: fabian.hinterer@indmath.uni-linz.ac.at and schneiderm2@hhmi.org
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Simon Hubmer
;
Simon Hubmer
(Conceptualization, Supervision, Writing – review & editing)
4
Johann Radon Institute Linz
, Linz, Austria
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Montserrat López-Martínez;
Montserrat López-Martínez
(Conceptualization, Writing – original draft, Writing – review & editing)
2
TU Wien, Institute of Applied Physics
, Vienna, Austria
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Ronny Ramlau
;
Ronny Ramlau
(Conceptualization, Funding acquisition, Supervision, Writing – review & editing)
1
Johannes Kepler University, Institute of Industrial Mathematics
, Linz, Austria
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Gerhard J. Schütz
Gerhard J. Schütz
(Conceptualization, Funding acquisition, Investigation, Supervision, Writing – original draft, Writing – review & editing)
2
TU Wien, Institute of Applied Physics
, Vienna, Austria
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a)Authors to whom correspondence should be addressed: fabian.hinterer@indmath.uni-linz.ac.at and schneiderm2@hhmi.org
Note: This paper is part of the APL Special Collection on Advances in Optical Microscopy for Bioimaging.
Appl. Phys. Lett. 123, 023703 (2023)
Article history
Received:
December 06 2022
Accepted:
June 28 2023
Citation
Fabian Hinterer, Magdalena C. Schneider, Simon Hubmer, Montserrat López-Martínez, Ronny Ramlau, Gerhard J. Schütz; Localization of fixed dipoles at high precision by accounting for sample drift during illumination. Appl. Phys. Lett. 10 July 2023; 123 (2): 023703. https://doi.org/10.1063/5.0137834
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