Single nucleotide polymorphism (SNP) analysis that is commonly performed using fluorescence is important in drug development and pathology research. In this study, to facilitate the analysis, multicolor fluorescence detection for SNP genotyping using a filter-less fluorescence detector (FFD) was investigated. FFDs do not require any optical filters for multicolor fluorescence detection. From the experimental results, FFD could identify 0 μM, 1 μM, and 10 μM solutions of Texas Red and fluorescein isothiocyanate. Moreover, a mixture of Texas Red and 6-FAM could be detected in the SNP genotyping simulation. Therefore, a small and low-cost SNP genotyping system is feasible.
REFERENCES
1.
B. S.
Shastry
, J. Hum. Genet.
47
, 561
(2002
).2.
A. J.
Brookes
, Gene
234
, 177
(1999
).3.
R.
Twyman
, Encyclopedia of Diagnostic Genomics and Proteomics
(Marcel Dekker, Inc.
, 2005
), p. 1202
.4.
A. C.
Syvänen
, Nat. Rev. Genet.
2
, 930
(2001
).5.
S.
Sauer
, D.
Lechner
, K.
Berlin
, H.
Lehrach
, J. L.
Escary
, N.
Fox
, and I. G.
Gut
, Nucl. Acids Res.
28
, e13
(2000
).6.
S.
Ye
, S.
Dhillon
, X.
Ke
, A. R.
Collins
, and I. N. M.
Day
, Nucl. Acids Res.
29
, e88
(2001
).7.
8.
B.
Sobrino
, M.
Brión
, and A.
Carracedo
, Forensic Sci. Int.
154
, 181
(2005
).9.
Y.
Maruyama
, K.
Sawada
, H.
Takao
, and M.
Ishida
, IEEE Trans. Electron Devices
53
, 553
(2006
).10.
Y.
Maruyama
, K.
Sawada
, H.
Takao
, and M.
Ishida
, Sens. Actuators, A
128
, 66
(2006
).11.
E. D.
Palik
, Handbook of Optical Constants of Solids
(Academic Press
, Orlando
, 1985
), pp. 547
–569
.12.
J. P.
McKelvey
, Solid State and Semiconductor Physics
(Krieger Publishing Company
, Florida
, 1986
), pp. 461
–469
.13.
R. B.
Merrill
, U.S. patent 5,965,875 (12 October 1999
).14.
T. J.
Huang
, M.
Liu
, J. D.
Knight
, W. W.
Grody
, J. F.
Miller
, and C. M.
Ho
, Nucl. Acids Res.
30
, e55
(2002
).15.
The International SNP Map Working Group
, Nature
409
, 928
(2001
).16.
D. G.
Wang
, J. B.
Fan
, C. J.
Siao
, A.
Berno
, P.
Young
, R.
Sapolsky
, G.
Ghandour
, N.
Perkins
, E.
Winchester
, J.
Spencer
, L.
Kruglyak
, L.
Stein
, L.
Hsie
, T.
Topaloglou
, E.
Hubbell
, E.
Robinson
, M.
Mittmann
, M. S.
Morris
, N.
Shen
, D.
Kilburn
, J.
Rioux
, C.
Nusbaum
, S.
Rozen
, T. J.
Hudson
, R.
Lipshutz
, M.
Chee
, and E. S.
Lander
, Science
280
, 1077
(1998
).© 2013 AIP Publishing LLC.
2013
AIP Publishing LLC
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