Ebola Virus Disease (EVD) is a disease caused by a virus of the genus Ebolavirus (EBOV), family Filoviridae. Ebola virus is classifed into five types, namely Zaire ebolavirus (ZEBOV), Sudan ebolavirus (SEBOV), Bundibugyo ebolavirus (BEBOV), Tai Forest ebolavirus also known as Cote d’Ivoire ebolavirus (CIEBOV), and Reston ebolavirus (REBOV). Identification of kinship types of Ebola virus can be performed using phylogenetic trees. In this study, the phylogenetic tree constructed by UPGMA method in which there are Multiple Alignment using Progressive Method. The results concluded that the phylogenetic tree formation kinship ebola virus types that kind of Tai Forest ebolavirus close to Bundibugyo ebolavirus but the layout state ebola epidemic spread far apart. The genetic distance for this type of Bundibugyo ebolavirus with Tai Forest ebolavirus is 0.3725. Type Tai Forest ebolavirus similar to Bundibugyo ebolavirus not inuenced by the proximity of the area ebola epidemic spread.
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1 August 2017
INTERNATIONAL CONFERENCE ON MATHEMATICS: PURE, APPLIED AND COMPUTATION: Empowering Engineering using Mathematics
23 November 2016
Surabaya, Indonesia
Research Article|
August 01 2017
Application of unweighted pair group methods with arithmetic average (UPGMA) for identification of kinship types and spreading of ebola virus through establishment of phylogenetic tree
Tri Andriani;
Tri Andriani
a)
1Department of Mathematics,
Institut Teknologi Sepuluh Nopember
, Indonesia
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Mohammad Isa Irawan
Mohammad Isa Irawan
b)
2Department of Mathematics,
Institut Teknologi Sepuluh Nopember
, Indonesia
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AIP Conf. Proc. 1867, 020064 (2017)
Citation
Tri Andriani, Mohammad Isa Irawan; Application of unweighted pair group methods with arithmetic average (UPGMA) for identification of kinship types and spreading of ebola virus through establishment of phylogenetic tree. AIP Conf. Proc. 1 August 2017; 1867 (1): 020064. https://doi.org/10.1063/1.4994467
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