Nuclear Overhauser effect spectroscopy (NOESY) data contain information about the geometry of a system of magnetically interacting nuclear spins. They thus allow to determine the positions of atoms in space and even suffice to infer the entire structure of a biomolecule. Yet, interpretation of NOESY spectra is often still qualitative. This is mostly due to the complexity of the theories that describe the data. We outline a Bayesian algorithm that estimates the configuration of protons by analysing unassigned NOESY volumes which may stem from spectra recorded at different mixing times. The method relies on the calculation of peak volumes with a relaxation matrix model and thereby incorporates spin‐diffusion effects. Proton coordinates and nuisance parameters, such as the scales and errors of the spectra, are estimated using Markov Chain Monte Carlo sampling.
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16 November 2004
BAYESIAN INFERENCE AND MAXIMUM ENTROPY METHODS IN SCIENCE AND ENGINEERING: 24th International Workshop on Bayesian Inference and Maximum Entropy Methods in Science and Engineering
25-30 July 2004
Garching (Germany)
Research Article|
November 16 2004
Estimation of proton configurations from NOESY spectra Available to Purchase
Michael Habeck;
Michael Habeck
*Institut Pasteur, 25‐28, rue du Dr. Roux, 75015 Paris, France
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Wolfgang Rieping;
Wolfgang Rieping
*Institut Pasteur, 25‐28, rue du Dr. Roux, 75015 Paris, France
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Michael Nilges
Michael Nilges
*Institut Pasteur, 25‐28, rue du Dr. Roux, 75015 Paris, France
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Michael Habeck
st
Wolfgang Rieping
st
Michael Nilges
st
*Institut Pasteur, 25‐28, rue du Dr. Roux, 75015 Paris, France
AIP Conf. Proc. 735, 119–126 (2004)
Citation
Michael Habeck, Wolfgang Rieping, Michael Nilges; Estimation of proton configurations from NOESY spectra. AIP Conf. Proc. 16 November 2004; 735 (1): 119–126. https://doi.org/10.1063/1.1835205
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