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Journal Articles

Identifying protein conformational states in the Protein Data Bank: Toward unlocking the potential of integrative dynamics studies

Joseph I. J. Ellaway, Stephen Anyango, Sreenath Nair, Hossam A. Zaki, Nurul Nadzirin, Harold R. Powell, Aleksandras Gutmanas, Mihaly Varadi, Sameer Velankar

Struct. Dyn. 11, 034701 (2024)

https://doi.org/10.1063/4.0000251

Published: May 2024

View article titled, Identifying protein conformational states in the Protein Data Bank: Toward unlocking the potential of integrative dynamics studies

Journal Articles

Structural dynamics at surfaces by ultrafast reflection high-energy electron diffraction

Michael Horn-von Hoegen

Struct. Dyn. 11, 021301 (2024)

https://doi.org/10.1063/4.0000234

Published: March 2024

View article titled, Structural dynamics at surfaces by ultrafast reflection high-energy electron diffraction

Journal Articles

Blue and red in the protein world: Photoactive yellow protein and phytochromes as revealed by time-resolved crystallography

Marius Schmidt, Emina A. Stojković

Struct. Dyn. 11, 014701 (2024)

https://doi.org/10.1063/4.0000233

Published: January 2024

View article titled, Blue and red in the protein world: Photoactive yellow protein and phytochromes as revealed by time-resolved crystallography

Journal Articles

Relativistic ultrafast electron diffraction at high repetition rates

Struct. Dyn. 10, 064302 (2023)

https://doi.org/10.1063/4.0000203

Published: December 2023

View article titled, Relativistic ultrafast electron diffraction at high repetition rates

Journal Articles

Simulation of ultrafast electron diffraction intensity under coherent acoustic phonons

Yongzhao Zhang, Jun Li, Wentao Wang, Huanfang Tian, Wenli Gao, Jianqi Li, Shuaishuai Sun, Huaixin Yang

Struct. Dyn. 10, 064102 (2023)

https://doi.org/10.1063/4.0000199

Published: November 2023

View article titled, Simulation of ultrafast electron diffraction intensity under coherent acoustic phonons

Journal Articles

RF acceleration of ultracold electron bunches

D. F. J. Nijhof, T. C. H. de Raadt, J. V. Huijts, J. G. H. Franssen, P. H. A. Mutsaers, O. J. Luiten

Struct. Dyn. 10, 054303 (2023)

https://doi.org/10.1063/4.0000200

Published: October 2023

View article titled, RF acceleration of ultracold electron bunches

Includes: Supplementary data

Journal Articles

Nonequilibrium warm dense matter investigated with laser–plasma-based XANES down to the femtosecond

F. Dorchies, K. Ta Phuoc, L. Lecherbourg

Struct. Dyn. 10, 054301 (2023)

https://doi.org/10.1063/4.0000202

Published: September 2023

View article titled, Nonequilibrium warm dense matter investigated with laser–plasma-based XANES down to the femtosecond

Journal Articles

Molecular size dependence on achievable resolution from XFEL single-particle 3D reconstruction

Miki Nakano, Osamu Miyashita, Florence Tama

Struct. Dyn. 10, 024101 (2023)

https://doi.org/10.1063/4.0000175

Published: March 2023

View article titled, Molecular size dependence on achievable resolution from XFEL single-particle 3D reconstruction

Includes: Supplementary data

Journal Articles

Biological function investigated by time-resolved structure determination

Marius Schmidt

Struct. Dyn. 10, 010901 (2023)

https://doi.org/10.1063/4.0000177

Published: February 2023

View article titled, Biological function investigated by time-resolved structure determination

Journal Articles

Accurate quantification of lattice temperature dynamics from ultrafast electron diffraction of single-crystal films using dynamical scattering simulations

Daniel B. Durham, Colin Ophus, Khalid M. Siddiqui, Andrew M. Minor, Daniele Filippetto

Struct. Dyn. 9, 064302 (2022)

https://doi.org/10.1063/4.0000170

Published: December 2022

View article titled, Accurate quantification of lattice temperature dynamics from ultrafast electron diffraction of single-crystal films using dynamical scattering simulations

Journal Articles

Modeling difference x-ray scattering observations from an integral membrane protein within a detergent micelle

Daniel Sarabi, Lucija Ostojić, Robert Bosman, Adams Vallejos, Johanna-Barbara Linse, Michael Wulff, Matteo Levantino, Richard Neutze

Struct. Dyn. 9, 054102 (2022)

https://doi.org/10.1063/4.0000157

Published: October 2022

View article titled, Modeling difference x-ray scattering observations from an integral membrane protein within a detergent micelle

Journal Articles

Picosecond infrared laser driven sample delivery for simultaneous liquid-phase and gas-phase electron diffraction studies

Zhipeng Huang, Meghanad Kayanattil, Stuart A. Hayes, R. J. Dwayne Miller

Struct. Dyn. 9, 054301 (2022)

https://doi.org/10.1063/4.0000159

Published: September 2022

View article titled, Picosecond infrared laser driven sample delivery for simultaneous liquid-phase and gas-phase electron diffraction studies

Includes: Supplementary data

Journal Articles

Dynamics retrieval from stochastically weighted incomplete data by low-pass spectral analysis

Cecilia M. Casadei, Ahmad Hosseinizadeh, Gebhard F. X. Schertler, Abbas Ourmazd, Robin Santra

Struct. Dyn. 9, 044101 (2022)

https://doi.org/10.1063/4.0000156

Published: August 2022

View article titled, Dynamics retrieval from stochastically weighted incomplete data by low-pass spectral analysis

Journal Articles

A narrow bandwidth extreme ultra-violet light source for time- and angle-resolved photoemission spectroscopy

Qinda Guo, Maciej Dendzik, Antonija Grubišić-Čabo, Magnus H. Berntsen, Cong Li, Wanyu Chen, Bharti Matta, Ulrich Starke, Björn Hessmo, Jonas Weissenrieder, Oscar Tjernberg

Struct. Dyn. 9, 024304 (2022)

https://doi.org/10.1063/4.0000149

Published: April 2022

View article titled, A narrow bandwidth extreme ultra-violet light source for time- and angle-resolved photoemission spectroscopy

Journal Articles

A kiloelectron-volt ultrafast electron micro-diffraction apparatus using low emittance semiconductor photocathodes

W. H. Li, C. J. R. Duncan, M. B. Andorf, A. C. Bartnik, E. Bianco, L. Cultrera, A. Galdi, M. Gordon, M. Kaemingk, C. A. Pennington, L. F. Kourkoutis, I. V. Bazarov, J. M. Maxson

Struct. Dyn. 9, 024302 (2022)

https://doi.org/10.1063/4.0000138

Published: March 2022

View article titled, A kiloelectron-volt ultrafast electron micro-diffraction apparatus using low emittance semiconductor photocathodes

Journal Articles

Investigations of structural and dynamical mechanisms of ice formation regulated by graphene oxide nanosheets

Shengkai Zhang, Jingjing Han, Xiang Luo, Zhixin Wang, Xudong Gu, Na Li, Nicolas R. de Souza, Victoria Garcia Sakai, Xiang-Qiang Chu

Struct. Dyn. 8, 054901 (2021)

https://doi.org/10.1063/4.0000111

Published: September 2021

View article titled, Investigations of structural and dynamical mechanisms of ice formation regulated by graphene oxide nanosheets

Includes: Supplementary data

Journal Articles

Reproducibility of protein x-ray diffuse scattering and potential utility for modeling atomic displacement parameters

Zhen Su, Medhanjali Dasgupta, Frédéric Poitevin, Irimpan I. Mathews, Henry van den Bedem, Michael E. Wall, Chun Hong Yoon, Mark A. Wilson

Struct. Dyn. 8, 044701 (2021)

https://doi.org/10.1063/4.0000087

Published: July 2021

View article titled, Reproducibility of protein x-ray diffuse scattering and potential utility for modeling atomic displacement parameters

Includes: Supplementary data

Journal Articles

Laboratory diffracted x-ray blinking to monitor picometer motions of protein molecules and application to crystalline materials

Tatsuya Arai, Rena Inamasu, Hiroki Yamaguchi, Daisuke Sasaki, Ayana Sato-Tomita, Hiroshi Sekiguchi, Kazuhiro Mio, Sakae Tsuda, Masahiro Kuramochi, Yuji C. Sasaki

Struct. Dyn. 8, 044302 (2021)

https://doi.org/10.1063/4.0000112

Published: July 2021

View article titled, Laboratory diffracted x-ray blinking to monitor picometer motions of protein molecules and application to crystalline materials

Includes: Supplementary data

Journal Articles

Selecting XFEL single-particle snapshots by geometric machine learning

Eduardo R. Cruz-Chú, Ahmad Hosseinizadeh, Ghoncheh Mashayekhi, Russell Fung, Abbas Ourmazd, Peter Schwander

Struct. Dyn. 8, 014701 (2021)

https://doi.org/10.1063/4.0000060

Published: February 2021

View article titled, Selecting XFEL single-particle snapshots by geometric machine learning

Includes: Supplementary data

Journal Articles

Signatures of electronic and nuclear coherences in ultrafast molecular x-ray and electron diffraction

Jérémy R. Rouxel, Daniel Keefer, Shaul Mukamel

Struct. Dyn. 8, 014101 (2021)

https://doi.org/10.1063/4.0000043

Published: January 2021

View article titled, Signatures of electronic and nuclear coherences in ultrafast molecular x-ray and electron diffraction

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Topics

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Identifying protein conformational states in the Protein Data Bank: Toward unlocking the potential of integrative dynamics studies

Structural dynamics at surfaces by ultrafast reflection high-energy electron diffraction

Blue and red in the protein world: Photoactive yellow protein and phytochromes as revealed by time-resolved crystallography

Relativistic ultrafast electron diffraction at high repetition rates

Simulation of ultrafast electron diffraction intensity under coherent acoustic phonons

RF acceleration of ultracold electron bunches

Nonequilibrium warm dense matter investigated with laser–plasma-based XANES down to the femtosecond

Molecular size dependence on achievable resolution from XFEL single-particle 3D reconstruction

Biological function investigated by time-resolved structure determination

Accurate quantification of lattice temperature dynamics from ultrafast electron diffraction of single-crystal films using dynamical scattering simulations

Modeling difference x-ray scattering observations from an integral membrane protein within a detergent micelle

Picosecond infrared laser driven sample delivery for simultaneous liquid-phase and gas-phase electron diffraction studies

Dynamics retrieval from stochastically weighted incomplete data by low-pass spectral analysis

A narrow bandwidth extreme ultra-violet light source for time- and angle-resolved photoemission spectroscopy

A kiloelectron-volt ultrafast electron micro-diffraction apparatus using low emittance semiconductor photocathodes

Investigations of structural and dynamical mechanisms of ice formation regulated by graphene oxide nanosheets

Reproducibility of protein x-ray diffuse scattering and potential utility for modeling atomic displacement parameters

Laboratory diffracted x-ray blinking to monitor picometer motions of protein molecules and application to crystalline materials

Selecting XFEL single-particle snapshots by geometric machine learning

Signatures of electronic and nuclear coherences in ultrafast molecular x-ray and electron diffraction

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