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Journal Articles

Monte Carlo, blocking, and inference: How to measure the renormalization group flow

Luca Di Carlo
Journal: American Journal of Physics
Am. J. Phys. 93, 193–200 (2025)
https://doi.org/10.1119/5.0179365
Published: February 2025
View article titled, Monte Carlo, blocking, and inference: How to measure the renormalization group flow
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Journal Articles

Cognitive biases can move opinion dynamics from consensus to signatures of transient chaos

Emily Dong, Sarah Marzen
Journal: American Journal of Physics
Am. J. Phys. 92, 801–808 (2024)
https://doi.org/10.1119/5.0220792
Published: October 2024
View article titled, Cognitive biases can move opinion dynamics from consensus to signatures of transient chaos
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Journal Articles

Concepts in Monte Carlo sampling

Gabriele Tartero, Werner Krauth
Journal: American Journal of Physics
Am. J. Phys. 92, 65–77 (2024)
https://doi.org/10.1119/5.0176853
Published: January 2024
View article titled, Concepts in Monte Carlo sampling
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Includes: Supplementary data
Journal Articles

Pandemic modeling with the game of life

David Faux, Thesha Thavaraja, Alana Croucher
Journal: American Journal of Physics
Am. J. Phys. 91, 1008–1014 (2023)
https://doi.org/10.1119/5.0166146
Published: December 2023
View article titled, Pandemic modeling with the game of life
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Includes: Supplementary data
Journal Articles

On numerical solutions of the time-dependent Schrödinger equation

Wytse van Dijk
Journal: American Journal of Physics
Am. J. Phys. 91, 826–839 (2023)
https://doi.org/10.1119/5.0159866
Published: October 2023
View article titled, On numerical solutions of the time-dependent Schrödinger equation
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Journal Articles

The game of life as a species model

FeaturedScilight
David A. Faux, Peter Bassom
Journal: American Journal of Physics
Am. J. Phys. 91, 561–568 (2023)
https://doi.org/10.1119/5.0150858
Published: July 2023
View article titled, The game of life as a species model
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Includes: Supplementary data
Journal Articles

Simulating gravitational motion, gas dynamics, and structure in the cosmos

J. W. Powell, L. Caudill, O. Young
Journal: American Journal of Physics
Am. J. Phys. 91, 478–485 (2023)
https://doi.org/10.1119/5.0144906
Published: June 2023
View article titled, Simulating gravitational motion, gas dynamics, and structure in the cosmos
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Includes: Supplementary data
Journal Articles

Continuous fractional component Gibbs ensemble Monte Carlo

Niklas Mayr, Michael Haring, Thomas Wallek
Journal: American Journal of Physics
Am. J. Phys. 91, 235–246 (2023)
https://doi.org/10.1119/5.0135841
Published: March 2023
View article titled, Continuous fractional component Gibbs ensemble Monte Carlo
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Includes: Supplementary data
Journal Articles

Particle-in-cell method for plasmas in the one-dimensional electrostatic limit

Sara Gomez, Jaime Humberto Hoyos, Juan Alejandro Valdivia
Journal: American Journal of Physics
Am. J. Phys. 91, 225–234 (2023)
https://doi.org/10.1119/5.0135515
Published: March 2023
View article titled, Particle-in-cell method for plasmas in the one-dimensional electrostatic limit
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Includes: Supplementary data
Journal Articles

An introduction to the Markov chain Monte Carlo method

Wenlong Wang
Journal: American Journal of Physics
Am. J. Phys. 90, 921–934 (2022)
https://doi.org/10.1119/5.0122488
Published: December 2022
View article titled, An introduction to the Markov chain Monte Carlo method
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Journal Articles

Introducing simple models of social systems

Pablo Jensen
Journal: American Journal of Physics
Am. J. Phys. 90, 462–468 (2022)
https://doi.org/10.1119/5.0086028
Published: June 2022
View article titled, Introducing simple models of social systems
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Includes: Supplementary data
Journal Articles

Voronoi cell analysis: The shapes of particle systems

Emanuel A. Lazar, Jiayin Lu, Chris H. Rycroft
Journal: American Journal of Physics
Am. J. Phys. 90, 469–480 (2022)
https://doi.org/10.1119/5.0087591
Published: June 2022
View article titled, Voronoi cell analysis: The shapes of particle systems
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Journal Articles

Simulating epidemics via the theory of dynamical systems

FeaturedScilight
Giorgio Mantica
Journal: American Journal of Physics
Am. J. Phys. 90, 380–393 (2022)
https://doi.org/10.1119/5.0082825
Published: May 2022
View article titled, Simulating epidemics via the theory of dynamical systems
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Journal Articles

Quantifying biomolecular diffusion with a “spherical cow” model

Frederico Campos Freitas, Sandra Byju, Asem Hassan, Ronaldo Junio de Oliveira, Paul C. Whitford
Journal: American Journal of Physics
Am. J. Phys. 90, 225–238 (2022)
https://doi.org/10.1119/5.0075952
Published: March 2022
View article titled, Quantifying biomolecular diffusion with a “spherical cow” model
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Journal Articles

Exploring complex pattern formation with convolutional neural networks

Christian Scholz, Sandy Scholz
Journal: American Journal of Physics
Am. J. Phys. 90, 141–151 (2022)
https://doi.org/10.1119/5.0065458
Published: February 2022
View article titled, Exploring complex pattern formation with convolutional neural networks
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Includes: Supplementary data
Journal Articles

A gentle introduction to the non-equilibrium physics of trajectories: Theory, algorithms, and biomolecular applications

Editor’s Pick
Daniel M. Zuckerman, John D. Russo
Journal: American Journal of Physics
Am. J. Phys. 89, 1048–1061 (2021)
https://doi.org/10.1119/10.0005603
Published: November 2021
View article titled, A gentle introduction to the non-equilibrium physics of trajectories: Theory, algorithms, and biomolecular applications
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Journal Articles

Molecular dynamics simulation of synchronization of a driven particle

Tiare Guerrero, Danielle McDermott
Journal: American Journal of Physics
Am. J. Phys. 89, 975–981 (2021)
https://doi.org/10.1119/10.0005037
Published: October 2021
View article titled, Molecular dynamics simulation of synchronization of a driven particle
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Includes: Supplementary data
Journal Articles

Digital imaging of a random walk by computer simulation: Using a simple model to interpret the effects of finite spatio-temporal resolution

Swayamshree Patra, Swagata Dey, Krishanu Ray, Debashish Chowdhury
Journal: American Journal of Physics
Am. J. Phys. 89, 437–442 (2021)
https://doi.org/10.1119/10.0002718
Published: April 2021
View article titled, Digital imaging of a random walk by computer simulation: Using a simple model to interpret the effects of finite spatio-temporal resolution
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Journal Articles

Structure of numerical algorithms and advanced mechanics

Siu A. Chin
Journal: American Journal of Physics
Am. J. Phys. 88, 883–894 (2020)
https://doi.org/10.1119/10.0001616
Published: October 2020
View article titled, Structure of numerical algorithms and advanced mechanics
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Journal Articles

Weyl's problem: A computational approach

Isaac Bowser, Ken Kiers, Erica Mitchell, Joshua Kiers
Journal: American Journal of Physics
Am. J. Phys. 88, 769–783 (2020)
https://doi.org/10.1119/10.0001657
Published: September 2020
View article titled, Weyl's problem: A computational approach
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